ctcRbase

Entry Detail

---



General Information

Database ID: SKCM08060 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: AGO4 Full Name: argonaute RISC catalytic component 4 Category: mRNA Synonyms: EIF2C4 Chromosome: chr1 Strand: + Coordinate: Start Site(bp): 35808172 End Site(bp): 35857890 Gene Summary: This gene encodes a member of the Argonaute family of proteins which contain PAZ and PIWI domains and play an integral role in RNA interference and short-interfering-RNA-mediated gene silencing. This gene is located on chromosome 1 in a cluster of related family members. [provided by RefSeq, Mar 2017] External Links: Ensembl ID: ENSG00000134698 HGNC ID: HGNC:18424 Entrez Gene: 192670

Expression Profile of AGO4 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-let-7a-5p YES YES YES hsa-let-7b-5p YES NO YES hsa-let-7c-5p YES YES YES hsa-let-7d-5p YES NO YES hsa-let-7e-5p YES YES YES hsa-let-7f-5p YES NO YES hsa-let-7g-5p YES YES YES hsa-let-7i-5p YES YES YES hsa-miR-130a-3p YES YES YES hsa-miR-130b-3p YES YES YES hsa-miR-135a-5p YES YES NO hsa-miR-135b-5p YES YES NO hsa-miR-137 YES YES YES hsa-miR-138-5p YES YES NO hsa-miR-140-3p YES NO YES hsa-miR-148a-3p YES YES NO hsa-miR-148b-3p YES YES NO hsa-miR-152-3p YES YES NO hsa-miR-181a-5p YES YES YES hsa-miR-181b-5p YES YES YES hsa-miR-181c-5p YES YES YES hsa-miR-181d-5p YES YES YES hsa-miR-199a-5p YES YES NO hsa-miR-199b-5p YES YES NO hsa-miR-204-5p YES YES NO hsa-miR-211-5p YES YES NO hsa-miR-21-5p YES YES YES hsa-miR-216a-5p YES YES NO hsa-miR-24-3p YES YES YES hsa-miR-301a-3p YES YES YES hsa-miR-301b-3p YES YES YES hsa-miR-30a-5p YES NO YES hsa-miR-30b-5p YES NO YES hsa-miR-30c-5p YES NO YES hsa-miR-30d-5p YES NO YES hsa-miR-30e-5p YES NO YES hsa-miR-326 YES YES NO hsa-miR-330-5p YES YES NO hsa-miR-34a-5p YES YES YES hsa-miR-34c-5p YES YES YES hsa-miR-377-3p YES YES NO hsa-miR-421 YES YES NO hsa-miR-448 YES YES NO hsa-miR-449a YES YES YES hsa-miR-449b-5p YES YES YES hsa-miR-454-3p YES YES YES hsa-miR-455-3p YES NO YES hsa-miR-494-3p YES YES NO hsa-miR-499a-5p YES YES NO hsa-miR-506-3p YES YES NO hsa-miR-542-3p YES YES NO hsa-miR-590-5p YES YES YES hsa-miR-599 YES YES NO hsa-miR-98-5p YES YES YES Display: