ctcRbase

Entry Detail

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General Information

Database ID: SKCM08067 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: SLAIN2 Full Name: SLAIN motif family member 2 Category: mRNA Synonyms: KIAA1458 Chromosome: chr4 Strand: + Coordinate: Start Site(bp): 48341322 End Site(bp): 48426212 Gene Summary: NA External Links: Ensembl ID: ENSG00000109171 HGNC ID: HGNC:29282 Entrez Gene: 57606

Expression Profile of SLAIN2 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-103a-3p YES YES YES hsa-miR-106a-5p YES YES YES hsa-miR-106b-5p YES YES YES hsa-miR-107 YES YES YES hsa-miR-124-3p YES NO YES hsa-miR-1271-5p YES YES YES hsa-miR-1297 YES YES NO hsa-miR-132-3p YES YES YES hsa-miR-1-3p YES YES NO hsa-miR-140-3p YES NO YES hsa-miR-141-3p YES YES YES hsa-miR-153-3p YES YES YES hsa-miR-155-5p YES YES NO hsa-miR-17-5p YES YES YES hsa-miR-181a-5p YES YES YES hsa-miR-181b-5p YES YES YES hsa-miR-181c-5p YES YES YES hsa-miR-181d-5p YES YES YES hsa-miR-182-5p YES NO YES hsa-miR-200a-3p YES YES YES hsa-miR-206 YES YES NO hsa-miR-20a-5p YES YES YES hsa-miR-20b-5p YES YES YES hsa-miR-212-3p YES YES YES hsa-miR-214-3p YES YES NO hsa-miR-216a-5p YES YES NO hsa-miR-216b-5p YES YES NO hsa-miR-218-5p YES NO YES hsa-miR-221-3p YES NO YES hsa-miR-222-3p YES NO YES hsa-miR-26a-5p YES YES NO hsa-miR-26b-5p YES YES NO hsa-miR-300 YES YES YES hsa-miR-301a-3p YES YES NO hsa-miR-302a-3p YES YES YES hsa-miR-302b-3p YES YES YES hsa-miR-302c-3p YES YES YES hsa-miR-302d-3p YES YES YES hsa-miR-302e YES YES YES hsa-miR-372-3p YES YES YES hsa-miR-373-3p YES YES YES hsa-miR-381-3p YES YES YES hsa-miR-382-5p YES YES NO hsa-miR-409-3p YES NO YES hsa-miR-448 YES YES YES hsa-miR-486-5p YES YES YES hsa-miR-490-3p YES NO YES hsa-miR-494-3p YES YES NO hsa-miR-506-3p YES NO YES hsa-miR-519d-3p YES YES YES hsa-miR-520a-3p YES YES YES hsa-miR-520b YES YES YES hsa-miR-520c-3p YES YES YES hsa-miR-520d-3p YES YES YES hsa-miR-520e YES YES YES hsa-miR-543 YES YES YES hsa-miR-613 YES YES NO hsa-miR-93-5p YES YES YES hsa-miR-9-5p YES NO YES hsa-miR-96-5p YES YES YES Display: