ctcRbase

Entry Detail

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General Information

Database ID: SKCM08115 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: HMBOX1 Full Name: homeobox containing 1 Category: mRNA Synonyms: HNF1LA|HOT1|PBHNF Chromosome: chr8 Strand: + Coordinate: Start Site(bp): 28890394 End Site(bp): 29064764 Gene Summary: NA External Links: Ensembl ID: ENSG00000147421 HGNC ID: HGNC:26137 Entrez Gene: 79618

Expression Profile of HMBOX1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-106a-5p NO YES YES hsa-miR-106b-5p NO YES YES hsa-miR-128-3p YES YES NO hsa-miR-135a-5p NO YES YES hsa-miR-135b-5p NO YES YES hsa-miR-137 YES NO YES hsa-miR-146a-5p YES YES NO hsa-miR-146b-5p YES YES NO hsa-miR-15a-5p YES YES YES hsa-miR-15b-5p YES YES YES hsa-miR-16-5p YES YES YES hsa-miR-17-5p NO YES YES hsa-miR-181a-5p YES YES NO hsa-miR-181b-5p YES YES NO hsa-miR-181c-5p YES YES NO hsa-miR-181d-5p YES YES NO hsa-miR-18a-5p YES YES YES hsa-miR-18b-5p YES YES YES hsa-miR-195-5p YES YES YES hsa-miR-200b-3p YES YES YES hsa-miR-200c-3p YES YES YES hsa-miR-208a-3p YES YES NO hsa-miR-208b-3p YES YES NO hsa-miR-20a-5p NO YES YES hsa-miR-20b-5p NO YES YES hsa-miR-221-3p NO YES YES hsa-miR-222-3p NO YES YES hsa-miR-224-5p YES YES YES hsa-miR-27a-3p YES NO YES hsa-miR-27b-3p YES NO YES hsa-miR-29a-3p YES YES NO hsa-miR-29b-3p YES YES NO hsa-miR-29c-3p YES YES NO hsa-miR-300 YES YES YES hsa-miR-302a-3p NO YES YES hsa-miR-302b-3p NO YES YES hsa-miR-302c-3p NO YES YES hsa-miR-302d-3p NO YES YES hsa-miR-302e NO YES YES hsa-miR-372-3p NO YES YES hsa-miR-373-3p NO YES YES hsa-miR-377-3p YES YES NO hsa-miR-381-3p YES YES YES hsa-miR-424-5p YES YES YES hsa-miR-429 YES YES YES hsa-miR-497-5p YES YES YES hsa-miR-519d-3p NO YES YES hsa-miR-520a-3p NO YES YES hsa-miR-520b NO YES YES hsa-miR-520c-3p NO YES YES hsa-miR-520d-3p NO YES YES hsa-miR-520e NO YES YES hsa-miR-613 YES YES NO hsa-miR-93-5p NO YES YES Display: