ctcRbase

Entry Detail

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General Information

Database ID: SKCM08222 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: CHMP1A Full Name: charged multivesicular body protein 1A Category: mRNA Synonyms: CHMP1|PCH8|PCOLN3|PRSM1|VPS46-1|VPS46A Chromosome: chr16 Strand: - Coordinate: Start Site(bp): 89644431 End Site(bp): 89657845 Gene Summary: This gene encodes a member of the CHMP/Chmp family of proteins which are involved in multivesicular body sorting of proteins to the interiors of lysosomes. The initial prediction of the protein sequence encoded by this gene suggested that the encoded protein was a metallopeptidase. The nomenclature has been updated recently to reflect the correct biological function of this encoded protein. Several transcripts encoding different isoforms have been found for this gene. [provided by RefSeq, Dec 2012] External Links: Ensembl ID: ENSG00000131165 HGNC ID: HGNC:8740 Entrez Gene: 5119

Expression Profile of CHMP1A Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-1271-5p YES NO YES hsa-miR-138-5p YES YES NO hsa-miR-182-5p YES YES YES hsa-miR-490-3p YES YES NO hsa-miR-873-5p YES YES NO hsa-miR-96-5p YES NO YES Display: