ctcRbase

Entry Detail

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General Information

Database ID: SKCM08233 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: WARS2 Full Name: tryptophanyl tRNA synthetase 2, mitochondrial Category: mRNA Synonyms: NEMMLAS|TrpRS Chromosome: chr1 Strand: - Coordinate: Start Site(bp): 119031216 End Site(bp): 119140671 Gene Summary: Aminoacyl-tRNA synthetases catalyze the aminoacylation of tRNA by their cognate amino acid. Because of their central role in linking amino acids with nucleotide triplets contained in tRNAs, aminoacyl-tRNA synthetases are thought to be among the first proteins that appeared in evolution. Two forms of tryptophanyl-tRNA synthetase exist, a cytoplasmic form, named WARS, and a mitochondrial form, named WARS2. This gene encodes the mitochondrial tryptophanyl-tRNA synthetase. Two alternative transcripts encoding different isoforms have been described. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000116874 HGNC ID: HGNC:12730 Entrez Gene: 10352

Expression Profile of WARS2 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-let-7a-5p YES YES YES hsa-let-7b-5p YES YES YES hsa-let-7c-5p YES YES YES hsa-let-7d-5p YES YES YES hsa-let-7e-5p YES YES YES hsa-let-7f-5p YES YES YES hsa-let-7g-5p YES YES YES hsa-let-7i-5p YES YES YES hsa-miR-122-5p YES YES NO hsa-miR-124-3p YES YES NO hsa-miR-128-3p YES YES NO hsa-miR-136-5p YES YES NO hsa-miR-137 YES YES NO hsa-miR-141-3p YES YES NO hsa-miR-146a-5p YES YES NO hsa-miR-146b-5p YES YES NO hsa-miR-185-5p YES YES NO hsa-miR-200a-3p YES YES NO hsa-miR-22-3p YES YES YES hsa-miR-296-3p YES YES NO hsa-miR-31-5p YES YES NO hsa-miR-320a YES YES YES hsa-miR-320b YES YES YES hsa-miR-320c YES YES YES hsa-miR-320d YES YES YES hsa-miR-326 YES YES YES hsa-miR-330-5p YES YES YES hsa-miR-361-5p YES YES NO hsa-miR-487b-3p YES YES NO hsa-miR-495-3p YES YES NO hsa-miR-9-5p YES YES YES hsa-miR-98-5p YES YES YES Display: