ctcRbase

Entry Detail

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General Information

Database ID: SKCM08273 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: NICN1 Full Name: nicolin 1 Category: mRNA Synonyms: - Chromosome: chr3 Strand: - Coordinate: Start Site(bp): 49422946 End Site(bp): 49429326 Gene Summary: This protein encoded by this gene localizes to the nucleus and is expressed in numerous tissues including brain, testis, liver, and kidney. This refseq contains genomic sequence in its 3' UTR which is not supported by experimental evidence. Computer predictions indicate that this region of the 3' UTR contains hairpin-forming self-complementary sequence which is possibly excised after transcription. This gene has a pseudogene on chromosome X. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000145029 HGNC ID: HGNC:18317 Entrez Gene: 84276

Expression Profile of NICN1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-122-5p YES YES YES hsa-miR-125a-5p YES YES NO hsa-miR-125b-5p YES YES NO hsa-miR-1-3p YES YES NO hsa-miR-206 YES YES NO hsa-miR-384 YES YES NO hsa-miR-613 YES YES NO Display: