ctcRbase

Entry Detail

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General Information

Database ID: SKCM08311 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: PCNX1 Full Name: pecanex 1 Category: mRNA Synonyms: PCNX|PCNXL1|pecanex Chromosome: chr14 Strand: + Coordinate: Start Site(bp): 70907405 End Site(bp): 71115382 Gene Summary: This gene encodes an evolutionarily conserved transmembrane protein similar to the pecanex protein in Drosophila. The fly protein is a component of the Notch signaling pathway, which functions in several developmental processes. [provided by RefSeq, Jul 2016] External Links: Ensembl ID: ENSG00000100731 HGNC ID: HGNC:19740 Entrez Gene: 22990

Expression Profile of PCNX1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-124-3p YES YES NO hsa-miR-125a-5p YES NO YES hsa-miR-125b-5p YES NO YES hsa-miR-1271-5p YES NO YES hsa-miR-128-3p YES NO YES hsa-miR-129-5p YES YES NO hsa-miR-1297 YES YES YES hsa-miR-130a-3p YES NO YES hsa-miR-130b-3p YES NO YES hsa-miR-182-5p YES YES YES hsa-miR-194-5p YES YES NO hsa-miR-199a-5p YES YES NO hsa-miR-199b-5p YES YES NO hsa-miR-200b-3p YES YES YES hsa-miR-200c-3p YES YES YES hsa-miR-205-5p YES YES YES hsa-miR-216a-5p YES YES YES hsa-miR-216b-5p YES NO YES hsa-miR-217 YES YES NO hsa-miR-224-5p YES YES NO hsa-miR-26a-5p YES YES YES hsa-miR-26b-5p YES YES YES hsa-miR-27a-3p YES YES YES hsa-miR-27b-3p YES YES YES hsa-miR-301a-3p YES NO YES hsa-miR-301b-3p YES NO YES hsa-miR-326 YES NO YES hsa-miR-329-3p YES NO NO hsa-miR-330-5p YES NO YES hsa-miR-335-5p YES YES YES hsa-miR-33a-5p YES YES YES hsa-miR-33b-5p YES YES YES hsa-miR-340-5p YES YES NO hsa-miR-362-3p YES NO NO hsa-miR-429 YES YES YES hsa-miR-454-3p YES NO YES hsa-miR-505-3p YES YES NO hsa-miR-506-3p YES YES NO hsa-miR-542-3p YES NO YES hsa-miR-653-5p YES YES NO hsa-miR-96-5p YES NO YES Display: