ctcRbase

Entry Detail

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General Information

Database ID: SKCM08524 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: DAPK1 Full Name: death associated protein kinase 1 Category: mRNA Synonyms: DAPK|ROCO3 Chromosome: chr9 Strand: + Coordinate: Start Site(bp): 87497228 End Site(bp): 87708633 Gene Summary: Death-associated protein kinase 1 is a positive mediator of gamma-interferon induced programmed cell death. DAPK1 encodes a structurally unique 160-kD calmodulin dependent serine-threonine kinase that carries 8 ankyrin repeats and 2 putative P-loop consensus sites. It is a tumor suppressor candidate. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Dec 2013] External Links: Ensembl ID: ENSG00000196730 HGNC ID: HGNC:2674 Entrez Gene: 1612

Expression Profile of DAPK1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-let-7a-5p YES YES YES hsa-let-7b-5p YES YES YES hsa-let-7c-5p YES YES YES hsa-let-7d-5p YES YES YES hsa-let-7e-5p YES YES YES hsa-let-7f-5p YES YES YES hsa-let-7g-5p YES YES YES hsa-let-7i-5p YES YES YES hsa-miR-124-3p YES YES YES hsa-miR-1297 YES YES YES hsa-miR-141-3p YES YES YES hsa-miR-143-3p YES YES YES hsa-miR-191-5p YES YES NO hsa-miR-200a-3p YES YES YES hsa-miR-23a-3p YES YES YES hsa-miR-23b-3p YES YES YES hsa-miR-26a-5p YES YES YES hsa-miR-26b-5p YES YES YES hsa-miR-329-3p YES YES YES hsa-miR-362-3p YES YES YES hsa-miR-384 YES YES NO hsa-miR-410-3p YES YES NO hsa-miR-506-3p YES YES NO hsa-miR-542-3p YES YES NO hsa-miR-543 YES YES NO hsa-miR-98-5p YES YES YES Display: