ctcRbase

Entry Detail

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General Information

Database ID: SKCM08542 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: SGSM2 Full Name: small G protein signaling modulator 2 Category: mRNA Synonyms: RUTBC1 Chromosome: chr17 Strand: + Coordinate: Start Site(bp): 2337498 End Site(bp): 2381058 Gene Summary: The protein encoded by this gene is a GTPase activator with activity towards RAB32 and RAB33B, which are regulators of membrane trafficking. The encoded protein inactivates RAB32 and can bind RAB9A-GTP, a protein required for RAB32 activation. [provided by RefSeq, Oct 2016] External Links: Ensembl ID: ENSG00000141258 HGNC ID: HGNC:29026 Entrez Gene: 9905

Expression Profile of SGSM2 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-103a-3p YES NO YES hsa-miR-107 YES NO YES hsa-miR-15a-5p YES NO YES hsa-miR-15b-5p YES NO YES hsa-miR-16-5p YES NO YES hsa-miR-195-5p YES NO YES hsa-miR-28-5p YES YES NO hsa-miR-34a-5p YES YES YES hsa-miR-34c-5p YES YES YES hsa-miR-424-5p YES NO YES hsa-miR-449a YES YES YES hsa-miR-449b-5p YES YES YES hsa-miR-485-5p YES YES NO hsa-miR-491-5p YES YES NO hsa-miR-497-5p YES NO YES hsa-miR-708-5p YES YES NO Display: