Entry Detail



General Information

Database ID:SKCM08612
Cancer Type:melanoma
Dataset:GSE38495
CTCs/CTM Isolation Method:immunomagnetic purification



Gene Information

ncRNA Symbol:AIFM1
Full Name:apoptosis inducing factor mitochondria associated 1
Category:mRNA
Synonyms:AIF|CMT2D|CMTX4|COWCK|COXPD6|DFNX5|NADMR|NAMSD|PDCD8
Chromosome:chrX
Strand:-
Coordinate:
Start Site(bp):130129362End Site(bp):130165887
Gene Summary:This gene encodes a flavoprotein essential for nuclear disassembly in apoptotic cells, and it is found in the mitochondrial intermembrane space in healthy cells. Induction of apoptosis results in the translocation of this protein to the nucleus where it affects chromosome condensation and fragmentation. In addition, this gene product induces mitochondria to release the apoptogenic proteins cytochrome c and caspase-9. Mutations in this gene cause combined oxidative phosphorylation deficiency 6 (COXPD6), a severe mitochondrial encephalomyopathy, as well as Cowchock syndrome, also known as X-linked recessive Charcot-Marie-Tooth disease-4 (CMTX-4), a disorder resulting in neuropathy, and axonal and motor-sensory defects with deafness and cognitive disability. Alternative splicing results in multiple transcript variants. A related pseudogene has been identified on chromosome 10. [provided by RefSeq, Aug 2015]
External Links:
Ensembl ID:ENSG00000156709
HGNC ID:HGNC:8768
Entrez Gene:9131



Expression Profile of AIFM1 Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA NamePITAmiRandaRNAhybrid
hsa-let-7a-5p
NO
YES
YES
hsa-let-7b-5p
NO
YES
YES
hsa-let-7c-5p
NO
YES
YES
hsa-let-7d-5p
NO
YES
YES
hsa-let-7e-5p
NO
YES
YES
hsa-let-7f-5p
NO
YES
YES
hsa-let-7g-5p
NO
YES
YES
hsa-let-7i-5p
NO
YES
YES
hsa-miR-125a-5p
NO
YES
YES
hsa-miR-125b-5p
NO
YES
YES
hsa-miR-145-5p
NO
YES
YES
hsa-miR-22-3p
NO
YES
YES
hsa-miR-25-3p
NO
YES
YES
hsa-miR-32-5p
NO
YES
YES
hsa-miR-363-3p
NO
YES
YES
hsa-miR-367-3p
NO
YES
YES
hsa-miR-376c-3p
YES
YES
NO
hsa-miR-425-5p
NO
YES
YES
hsa-miR-543
YES
YES
NO
hsa-miR-92a-3p
NO
YES
YES
hsa-miR-92b-3p
NO
YES
YES
hsa-miR-98-5p
NO
YES
YES
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