ctcRbase

Entry Detail

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General Information

Database ID: SKCM08701 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: NDST1 Full Name: N-deacetylase and N-sulfotransferase 1 Category: mRNA Synonyms: HSST|MRT46|NST1 Chromosome: chr5 Strand: + Coordinate: Start Site(bp): 150485818 End Site(bp): 150558211 Gene Summary: This gene encodes a member of the heparan sulfate/heparin GlcNAc N-deacetylase/ N-sulfotransferase family. The encoded enzyme is a type II transmembrane protein that resides in the Golgi apparatus. The encoded protein catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate to nitrogen of glucosamine in heparan sulfate. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Dec 2014] External Links: Ensembl ID: ENSG00000070614 HGNC ID: HGNC:7680 Entrez Gene: 3340

Expression Profile of NDST1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-124-3p YES NO YES hsa-miR-1251-5p YES NO YES hsa-miR-1271-5p YES NO YES hsa-miR-128-3p YES YES YES hsa-miR-137 YES NO YES hsa-miR-1-3p YES NO YES hsa-miR-140-3p YES NO YES hsa-miR-140-5p YES NO YES hsa-miR-148a-3p YES YES NO hsa-miR-148b-3p YES YES NO hsa-miR-149-5p YES NO YES hsa-miR-152-3p YES YES NO hsa-miR-185-5p YES NO YES hsa-miR-191-5p YES NO YES hsa-miR-200b-3p YES NO YES hsa-miR-200c-3p YES NO YES hsa-miR-206 YES NO YES hsa-miR-23a-3p YES NO YES hsa-miR-23b-3p YES NO YES hsa-miR-24-3p YES NO YES hsa-miR-29a-3p YES NO YES hsa-miR-29b-3p YES NO YES hsa-miR-29c-3p YES NO YES hsa-miR-323a-3p YES NO YES hsa-miR-346 YES NO YES hsa-miR-34a-5p YES NO YES hsa-miR-34c-5p YES NO YES hsa-miR-410-3p YES YES YES hsa-miR-423-5p YES NO YES hsa-miR-429 YES NO YES hsa-miR-433-3p YES YES NO hsa-miR-449a YES NO YES hsa-miR-449b-5p YES NO YES hsa-miR-490-3p YES NO YES hsa-miR-496 YES NO YES hsa-miR-613 YES NO YES hsa-miR-7-5p YES NO YES hsa-miR-873-5p YES NO YES hsa-miR-96-5p YES NO YES Display: