ctcRbase

Entry Detail

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General Information

Database ID: SKCM08751 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: CHST10 Full Name: carbohydrate sulfotransferase 10 Category: mRNA Synonyms: HNK-1ST|HNK1ST Chromosome: chr2 Strand: - Coordinate: Start Site(bp): 100391860 End Site(bp): 100417656 Gene Summary: This protein encoded by this gene transfers sulfate to the C-3 hydroxyl of terminal glucuronic acid of protein- and lipid-linked oligosaccharides. This protein was first identified as a sulfotransferase that acts on the human natural killer-1 (HNK-1) glycan; HNK-1 is a carbohydrate involved in neurodevelopment and synaptic plasticity.[provided by RefSeq, Feb 2011] External Links: Ensembl ID: ENSG00000115526 HGNC ID: HGNC:19650 Entrez Gene: 9486

Expression Profile of CHST10 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-1271-5p YES YES YES hsa-miR-137 NO YES YES hsa-miR-143-3p YES YES YES hsa-miR-182-5p YES YES YES hsa-miR-194-5p YES YES NO hsa-miR-23a-3p YES YES YES hsa-miR-23b-3p YES YES YES hsa-miR-24-3p YES YES NO hsa-miR-34a-5p YES YES NO hsa-miR-34c-5p YES YES NO hsa-miR-382-5p YES YES NO hsa-miR-383-5p YES YES NO hsa-miR-449a YES YES NO hsa-miR-449b-5p YES YES NO hsa-miR-488-3p YES YES NO hsa-miR-96-5p YES YES YES Display: