ctcRbase

Entry Detail

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General Information

Database ID: SKCM08754 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: NANOS1 Full Name: nanos C2HC-type zinc finger 1 Category: mRNA Synonyms: EC_Rep1a|NOS-1|NOS1|SPGF12|ZC2HC12A Chromosome: chr10 Strand: + Coordinate: Start Site(bp): 119029716 End Site(bp): 119033732 Gene Summary: This gene encodes a CCHC-type zinc finger protein that is a member of the nanos family. This protein co-localizes with the RNA-binding protein pumilio RNA-binding family member 2 and may be involved in regulating translation as a post-transcriptional repressor. Mutations in this gene are associated with spermatogenic impairment. [provided by RefSeq, Sep 2015] External Links: Ensembl ID: ENSG00000188613 HGNC ID: HGNC:23044 Entrez Gene: 340719

Expression Profile of NANOS1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-106a-5p YES YES YES hsa-miR-106b-5p YES YES YES hsa-miR-129-5p YES YES NO hsa-miR-136-5p YES YES YES hsa-miR-17-5p YES YES YES hsa-miR-200b-3p YES YES YES hsa-miR-200c-3p YES YES YES hsa-miR-20a-5p YES YES YES hsa-miR-20b-5p YES YES YES hsa-miR-221-3p YES NO YES hsa-miR-222-3p YES NO YES hsa-miR-28-5p YES YES YES hsa-miR-376c-3p YES YES NO hsa-miR-429 YES YES YES hsa-miR-431-5p YES YES NO hsa-miR-503-5p YES YES NO hsa-miR-519d-3p YES YES YES hsa-miR-708-5p YES YES YES hsa-miR-93-5p YES YES YES Display: