ctcRbase

Entry Detail

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General Information

Database ID: SKCM08761 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: MED20 Full Name: mediator complex subunit 20 Category: mRNA Synonyms: PRO0213|SRB2|TRFP Chromosome: chr6 Strand: - Coordinate: Start Site(bp): 41905354 End Site(bp): 41921139 Gene Summary: This gene encodes a component of the mediator complex (also known as TRAP, SMCC, DRIP, or ARC), a transcriptional coactivator complex thought to be required for the expression of almost all genes. The mediator complex is recruited by transcriptional activators or nuclear receptors to induce gene expression, by interacting with RNA polymerase II and promoting the formation of a transcriptional pre-initiation complex. A mutation in this gene has been associated with a novel infantile-onset neurodegenerative movement disorder. Alternatively spliced transcript variants have been identified. [provided by RefSeq, Mar 2015] External Links: Ensembl ID: ENSG00000124641 HGNC ID: HGNC:16840 Entrez Gene: 9477

Expression Profile of MED20 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-101-3p YES YES NO hsa-miR-103a-3p YES YES NO hsa-miR-107 YES YES NO hsa-miR-1224-5p YES NO YES hsa-miR-124-3p YES YES NO hsa-miR-125a-5p YES YES NO hsa-miR-125b-5p YES YES NO hsa-miR-128-3p YES YES NO hsa-miR-1297 YES YES NO hsa-miR-15a-5p NO YES YES hsa-miR-15b-5p NO YES YES hsa-miR-16-5p NO YES YES hsa-miR-181a-5p YES YES NO hsa-miR-181b-5p YES YES NO hsa-miR-181c-5p YES YES NO hsa-miR-181d-5p YES YES NO hsa-miR-194-5p YES YES NO hsa-miR-195-5p NO YES YES hsa-miR-210-3p YES YES NO hsa-miR-214-3p YES YES NO hsa-miR-217 YES YES NO hsa-miR-26a-5p YES YES NO hsa-miR-26b-5p YES YES NO hsa-miR-30b-5p YES YES NO hsa-miR-30c-5p YES YES NO hsa-miR-30d-5p YES YES NO hsa-miR-30e-5p YES YES NO hsa-miR-338-3p YES YES NO hsa-miR-370-3p NO YES YES hsa-miR-384 YES YES NO hsa-miR-424-5p NO YES YES hsa-miR-490-3p YES YES NO hsa-miR-497-5p NO YES YES hsa-miR-506-3p YES YES NO hsa-miR-542-3p YES YES NO hsa-miR-873-5p YES YES NO Display: