ctcRbase

Entry Detail

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General Information

Database ID: SKCM08780 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: CSRNP2 Full Name: cysteine and serine rich nuclear protein 2 Category: mRNA Synonyms: C12orf2|C12orf22|FAM130A1|PPP1R72|TAIP-12 Chromosome: chr12 Strand: - Coordinate: Start Site(bp): 51061205 End Site(bp): 51083664 Gene Summary: The protein encoded by this gene belongs to the CSRNP family of nuclear proteins that share conserved regions, including cysteine- and serine- rich regions, a basic domain, a transcriptional activation domain, and bind the sequence 'AGAGTG', thus have the hallmark of transcription factors. Studies in mice suggest that these genes may have redundant functions. Alternatively spliced transcript variants have been found for this gene. [provided by RefSeq, Aug 2011] External Links: Ensembl ID: ENSG00000110925 HGNC ID: HGNC:16006 Entrez Gene: 81566

Expression Profile of CSRNP2 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-1297 YES NO YES hsa-miR-136-5p YES YES NO hsa-miR-139-5p YES YES YES hsa-miR-147a YES NO NO hsa-miR-155-5p YES YES YES hsa-miR-15a-5p YES YES YES hsa-miR-15b-5p YES YES YES hsa-miR-16-5p YES YES YES hsa-miR-182-5p YES YES NO hsa-miR-195-5p YES YES YES hsa-miR-199a-5p YES NO YES hsa-miR-199b-5p YES NO YES hsa-miR-204-5p YES YES YES hsa-miR-211-5p YES YES YES hsa-miR-24-3p YES YES NO hsa-miR-26a-5p YES NO YES hsa-miR-26b-5p YES NO YES hsa-miR-296-3p YES YES NO hsa-miR-29a-3p YES YES YES hsa-miR-29b-3p YES YES YES hsa-miR-29c-3p YES YES YES hsa-miR-371a-5p YES YES NO hsa-miR-383-5p YES YES YES hsa-miR-384 YES YES NO hsa-miR-424-5p YES YES YES hsa-miR-491-5p YES YES YES hsa-miR-497-5p YES YES YES hsa-miR-503-5p YES NO NO hsa-miR-582-5p YES NO YES Display: