ctcRbase

Entry Detail

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General Information

Database ID: SKCM08791 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: TTC4 Full Name: tetratricopeptide repeat domain 4 Category: mRNA Synonyms: CNS1 Chromosome: chr1 Strand: + Coordinate: Start Site(bp): 54715822 End Site(bp): 54742657 Gene Summary: This gene encodes a protein that contains tetratricopeptide (TPR) repeats, which often mediate protein-protein interactions and chaperone activity. The encoded protein interacts with heat shock proteins 70 and 90. Alternative splicing results in multiple transcript variants. Naturally-occuring readthrough transcription occurs from upstream gene MROH (maestro heat-like repeat family member 7) to this gene. [provided by RefSeq, Apr 2014] External Links: Ensembl ID: ENSG00000243725 HGNC ID: HGNC:12394 Entrez Gene: 7268

Expression Profile of TTC4 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-182-5p YES YES NO hsa-miR-204-5p YES YES NO hsa-miR-211-5p YES YES NO hsa-miR-223-3p YES YES NO hsa-miR-27a-3p YES YES NO hsa-miR-27b-3p YES YES NO hsa-miR-33a-5p YES YES NO hsa-miR-33b-5p YES YES NO Display: