ctcRbase

Entry Detail

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General Information

Database ID: SKCM08822 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: C4orf46 Full Name: chromosome 4 open reading frame 46 Category: mRNA Synonyms: RCDG1 Chromosome: chr4 Strand: - Coordinate: Start Site(bp): 158666679 End Site(bp): 158672255 Gene Summary: This gene encodes a small, conserved protein of unknown function that is expressed in a variety of tissues. There are pseudogenes for this gene on chromosomes 6, 8, 16, and X. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Feb 2013] External Links: Ensembl ID: ENSG00000205208 HGNC ID: HGNC:27320 Entrez Gene: 201725

Expression Profile of C4orf46 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-10a-5p YES YES NO hsa-miR-10b-5p YES YES NO hsa-miR-124-3p YES YES YES hsa-miR-141-3p YES YES NO hsa-miR-143-3p YES YES NO hsa-miR-186-5p YES YES NO hsa-miR-192-5p YES YES YES hsa-miR-200a-3p YES YES NO hsa-miR-200b-3p YES YES NO hsa-miR-200c-3p YES YES NO hsa-miR-215-5p YES YES YES hsa-miR-216b-5p YES YES NO hsa-miR-30a-5p YES YES NO hsa-miR-30b-5p YES YES NO hsa-miR-30c-5p YES YES NO hsa-miR-30d-5p YES YES NO hsa-miR-30e-5p YES YES NO hsa-miR-33a-5p YES YES NO hsa-miR-33b-5p YES YES NO hsa-miR-378a-3p YES YES NO hsa-miR-384 YES YES NO hsa-miR-422a YES YES NO hsa-miR-429 YES YES NO hsa-miR-448 YES YES NO hsa-miR-495-3p YES YES NO hsa-miR-496 YES YES NO hsa-miR-506-3p YES YES YES hsa-miR-9-5p YES YES YES Display: