ctcRbase

Entry Detail

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General Information

Database ID: SKCM08831 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: HMGXB4 Full Name: HMG-box containing 4 Category: mRNA Synonyms: HMG2L1|HMGBCG|THC211630 Chromosome: chr22 Strand: + Coordinate: Start Site(bp): 35257452 End Site(bp): 35295807 Gene Summary: High mobility group (HMG) proteins are nonhistone chromosomal proteins. See HMG2 (MIM 163906) for additional information on HMG proteins.[supplied by OMIM, Nov 2010] External Links: Ensembl ID: ENSG00000100281 HGNC ID: HGNC:5003 Entrez Gene: 10042

Expression Profile of HMGXB4 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-let-7a-5p YES YES NO hsa-let-7b-5p YES YES NO hsa-let-7c-5p YES YES NO hsa-let-7d-5p YES YES NO hsa-let-7e-5p YES YES NO hsa-let-7f-5p YES YES NO hsa-let-7g-5p YES YES NO hsa-let-7i-5p YES YES NO hsa-miR-10a-5p YES YES NO hsa-miR-10b-5p YES YES NO hsa-miR-124-3p YES NO YES hsa-miR-129-5p YES YES NO hsa-miR-132-3p YES YES YES hsa-miR-138-5p YES YES YES hsa-miR-140-3p YES NO YES hsa-miR-141-3p YES YES NO hsa-miR-186-5p YES YES NO hsa-miR-200a-3p YES YES NO hsa-miR-212-3p YES YES YES hsa-miR-217 YES YES NO hsa-miR-23a-3p YES YES NO hsa-miR-23b-3p YES YES NO hsa-miR-300 YES YES YES hsa-miR-340-5p YES YES NO hsa-miR-381-3p YES YES YES hsa-miR-410-3p YES YES NO hsa-miR-488-3p YES YES NO hsa-miR-495-3p YES YES NO hsa-miR-506-3p YES NO YES hsa-miR-876-5p YES YES NO hsa-miR-98-5p YES YES NO Display: