ctcRbase

Entry Detail

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General Information

Database ID: SKCM08863 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: ARHGEF40 Full Name: Rho guanine nucleotide exchange factor 40 Category: mRNA Synonyms: SOLO Chromosome: chr14 Strand: + Coordinate: Start Site(bp): 21070270 End Site(bp): 21090240 Gene Summary: This gene encodes a protein similar to guanosine nucleotide exchange factors for Rho GTPases. The encoded protein contains in its C-terminus a GEF domain involved in exchange activity and a pleckstrin homology domain. Alternatively spliced transcripts that encode different proteins have been described. [provided by RefSeq, Mar 2014] External Links: Ensembl ID: ENSG00000165801 HGNC ID: HGNC:25516 Entrez Gene: 55701

Expression Profile of ARHGEF40 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-101-3p YES YES NO hsa-miR-106a-5p YES YES NO hsa-miR-106b-5p YES YES NO hsa-miR-124-3p YES YES YES hsa-miR-132-3p YES YES NO hsa-miR-136-5p YES YES NO hsa-miR-142-5p YES NO YES hsa-miR-143-3p YES YES YES hsa-miR-144-3p YES YES NO hsa-miR-146a-5p YES YES NO hsa-miR-153-3p YES YES YES hsa-miR-17-5p YES YES NO hsa-miR-20a-5p YES YES NO hsa-miR-20b-5p YES YES NO hsa-miR-212-3p YES YES NO hsa-miR-28-5p YES YES NO hsa-miR-302a-3p YES YES NO hsa-miR-302b-3p YES YES NO hsa-miR-302c-3p YES YES NO hsa-miR-302d-3p YES YES NO hsa-miR-302e YES YES NO hsa-miR-339-5p YES YES NO hsa-miR-340-5p YES YES YES hsa-miR-369-3p YES NO YES hsa-miR-372-3p YES YES NO hsa-miR-373-3p YES YES NO hsa-miR-374a-5p YES YES YES hsa-miR-374b-5p YES YES YES hsa-miR-410-3p YES YES YES hsa-miR-448 YES NO YES hsa-miR-506-3p YES YES NO hsa-miR-519d-3p YES YES NO hsa-miR-520a-3p YES YES NO hsa-miR-520b YES YES NO hsa-miR-520c-3p YES YES NO hsa-miR-520d-3p YES YES NO hsa-miR-520e YES YES NO hsa-miR-708-5p YES YES NO hsa-miR-758-3p YES YES NO hsa-miR-93-5p YES YES NO Display: