ctcRbase

Entry Detail

---



General Information

Database ID: SKCM08882 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: ANKRD1 Full Name: ankyrin repeat domain 1 Category: mRNA Synonyms: ALRP|C-193|CARP|CVARP|MCARP|bA320F15.2 Chromosome: chr10 Strand: - Coordinate: Start Site(bp): 90912096 End Site(bp): 90921276 Gene Summary: The protein encoded by this gene is localized to the nucleus of endothelial cells and is induced by IL-1 and TNF-alpha stimulation. Studies in rat cardiomyocytes suggest that this gene functions as a transcription factor. Interactions between this protein and the sarcomeric proteins myopalladin and titin suggest that it may also be involved in the myofibrillar stretch-sensor system. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000148677 HGNC ID: HGNC:15819 Entrez Gene: 27063

Expression Profile of ANKRD1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-10a-5p YES YES NO hsa-miR-10b-5p YES YES NO hsa-miR-218-5p YES YES NO hsa-miR-300 YES YES NO hsa-miR-33a-5p YES YES NO hsa-miR-33b-5p YES YES NO hsa-miR-340-5p YES YES NO hsa-miR-34a-5p YES YES NO hsa-miR-34c-5p YES YES NO hsa-miR-381-3p YES YES NO hsa-miR-410-3p YES YES NO hsa-miR-425-5p YES YES NO hsa-miR-449a YES YES NO hsa-miR-449b-5p YES YES NO hsa-miR-582-5p YES NO YES hsa-miR-873-5p YES YES NO Display: