ctcRbase

Entry Detail

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General Information

Database ID: SKCM08897 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: SMURF1 Full Name: SMAD specific E3 ubiquitin protein ligase 1 Category: mRNA Synonyms: - Chromosome: chr7 Strand: - Coordinate: Start Site(bp): 99027438 End Site(bp): 99144100 Gene Summary: This gene encodes a ubiquitin ligase that is specific for receptor-regulated SMAD proteins in the bone morphogenetic protein (BMP) pathway. This protein plays a key roll in the regulation of cell motility, cell signalling, and cell polarity. Alternative splicing results in multiple transcript variants encoding different isoforms.[provided by RefSeq, Dec 2010] External Links: Ensembl ID: ENSG00000198742 HGNC ID: HGNC:16807 Entrez Gene: 57154

Expression Profile of SMURF1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-106a-5p YES NO YES hsa-miR-106b-5p YES YES YES hsa-miR-10a-5p YES YES YES hsa-miR-10b-5p YES YES YES hsa-miR-125a-5p YES YES YES hsa-miR-125b-5p YES YES YES hsa-miR-137 YES NO YES hsa-miR-138-5p YES NO YES hsa-miR-140-5p YES YES YES hsa-miR-142-5p YES NO YES hsa-miR-145-5p YES YES NO hsa-miR-153-3p YES YES YES hsa-miR-15a-5p YES YES YES hsa-miR-15b-5p YES YES YES hsa-miR-16-5p YES YES YES hsa-miR-17-5p YES NO YES hsa-miR-194-5p YES NO YES hsa-miR-195-5p YES YES YES hsa-miR-196a-5p YES YES YES hsa-miR-196b-5p YES YES YES hsa-miR-197-3p YES YES NO hsa-miR-19a-3p YES YES YES hsa-miR-19b-3p YES YES YES hsa-miR-200b-3p YES YES YES hsa-miR-200c-3p YES YES YES hsa-miR-20a-5p YES NO YES hsa-miR-20b-5p YES NO YES hsa-miR-25-3p YES NO YES hsa-miR-323a-3p YES NO YES hsa-miR-32-5p YES NO YES hsa-miR-340-5p YES YES YES hsa-miR-363-3p YES NO YES hsa-miR-367-3p YES NO YES hsa-miR-370-3p YES YES NO hsa-miR-376c-3p YES YES NO hsa-miR-378a-3p YES YES NO hsa-miR-384 YES YES NO hsa-miR-422a YES YES NO hsa-miR-424-5p YES YES YES hsa-miR-425-5p YES YES NO hsa-miR-429 YES YES YES hsa-miR-431-5p YES YES YES hsa-miR-448 YES YES YES hsa-miR-486-5p YES YES NO hsa-miR-489-3p YES NO YES hsa-miR-490-3p YES YES NO hsa-miR-495-3p YES NO YES hsa-miR-497-5p YES YES YES hsa-miR-503-5p YES NO YES hsa-miR-519d-3p YES YES YES hsa-miR-92a-3p YES NO YES hsa-miR-92b-3p YES NO YES hsa-miR-93-5p YES YES YES Display: