ctcRbase

Entry Detail

General Information

Database ID:	SKCM08901
Cancer Type:	melanoma
Dataset:	GSE38495
CTCs/CTM Isolation Method:	immunomagnetic purification

Gene Information

ncRNA Symbol:

ALG2

Full Name:

ALG2, alpha-1,3/1,6-mannosyltransferase

Category:

mRNA

Synonyms:

Chromosome:

chr9

Strand:

Coordinate:

Start Site(bp):

99216426

End Site(bp):

99221956

Gene Summary:

This gene encodes a member of the glycosyltransferase 1 family. The encoded protein acts as an alpha 1,3 mannosyltransferase, mannosylating Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. Defects in this gene have been associated with congenital disorder of glycosylation type Ih (CDG-Ii). Alternative splicing results in multiple transcript variants. [provided by RefSeq, Nov 2008]

External Links:

Ensembl ID:	ENSG00000119523
HGNC ID:	HGNC:23159
Entrez Gene:	85365

Expression Profile of ALG2 Gene

Regulatory Relationship

mRNA targets:

miRNA targets:

miRNA Name	PITA	miRanda	RNAhybrid
hsa-miR-106a-5p	YES	YES	NO
hsa-miR-106b-5p	YES	YES	NO
hsa-miR-124-3p	YES	YES	YES
hsa-miR-1271-5p	YES	YES	NO
hsa-miR-1-3p	YES	YES	NO
hsa-miR-141-3p	YES	YES	YES
hsa-miR-144-3p	YES	YES	NO
hsa-miR-145-5p	YES	YES	NO
hsa-miR-17-5p	YES	YES	NO
hsa-miR-181a-5p	YES	YES	NO
hsa-miR-181b-5p	YES	YES	NO
hsa-miR-181c-5p	YES	YES	NO
hsa-miR-181d-5p	YES	YES	NO
hsa-miR-193a-3p	YES	YES	NO
hsa-miR-193b-3p	YES	YES	NO
hsa-miR-19a-3p	YES	YES	YES
hsa-miR-19b-3p	YES	YES	YES
hsa-miR-200a-3p	YES	YES	YES
hsa-miR-200b-3p	YES	YES	NO
hsa-miR-200c-3p	YES	YES	NO
hsa-miR-206	YES	YES	NO
hsa-miR-20a-5p	YES	YES	NO
hsa-miR-20b-5p	YES	YES	NO
hsa-miR-23a-3p	YES	YES	NO
hsa-miR-23b-3p	YES	YES	NO
hsa-miR-30a-5p	YES	YES	NO
hsa-miR-30b-5p	YES	YES	NO
hsa-miR-30c-5p	YES	YES	NO
hsa-miR-30d-5p	YES	YES	NO
hsa-miR-30e-5p	YES	YES	NO
hsa-miR-329-3p	YES	YES	NO
hsa-miR-362-3p	YES	YES	NO
hsa-miR-425-5p	YES	YES	NO
hsa-miR-429	YES	YES	NO
hsa-miR-506-3p	YES	YES	NO
hsa-miR-613	YES	YES	NO
hsa-miR-96-5p	YES	YES	NO

Display: