Entry Detail



General Information

Database ID:SKCM08942
Cancer Type:melanoma
Dataset:GSE38495
CTCs/CTM Isolation Method:immunomagnetic purification



Gene Information

ncRNA Symbol:SREBF1
Full Name:sterol regulatory element binding transcription factor 1
Category:mRNA
Synonyms:SREBP1|bHLHd1
Chromosome:chr17
Strand:-
Coordinate:
Start Site(bp):17810399End Site(bp):17837002
Gene Summary:This gene encodes a basic helix-loop-helix-leucine zipper (bHLH-Zip) transcription factor that binds to the sterol regulatory element-1 (SRE1), which is a motif that is found in the promoter of the low density lipoprotein receptor gene and other genes involved in sterol biosynthesis. The encoded protein is synthesized as a precursor that is initially attached to the nuclear membrane and endoplasmic reticulum. Following cleavage, the mature protein translocates to the nucleus and activates transcription. This cleaveage is inhibited by sterols. This gene is located within the Smith-Magenis syndrome region on chromosome 17. Alternative promoter usage and splicing result in multiple transcript variants, including SREBP-1a and SREBP-1c, which correspond to RefSeq transcript variants 2 and 3, respectively. [provided by RefSeq, Nov 2017]
External Links:
Ensembl ID:ENSG00000072310
HGNC ID:HGNC:11289
Entrez Gene:6720



Expression Profile of SREBF1 Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA NamePITAmiRandaRNAhybrid
hsa-miR-142-5p
YES
NO
YES
hsa-miR-340-5p
YES
YES
YES
Display: