ctcRbase

Entry Detail

---



General Information

Database ID: SKCM08944 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: SHROOM3 Full Name: shroom family member 3 Category: mRNA Synonyms: APXL3|MSTP013|SHRM|ShrmL Chromosome: chr4 Strand: + Coordinate: Start Site(bp): 76435100 End Site(bp): 76783253 Gene Summary: This gene encodes a PDZ-domain-containing protein that belongs to a family of Shroom-related proteins. This protein may be involved in regulating cell shape in certain tissues. A similar protein in mice is required for proper neurulation. [provided by RefSeq, Jan 2011] External Links: Ensembl ID: ENSG00000138771 HGNC ID: HGNC:30422 Entrez Gene: 57619

Expression Profile of SHROOM3 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-103a-3p YES NO YES hsa-miR-107 YES NO YES hsa-miR-1-3p YES YES NO hsa-miR-140-5p YES YES YES hsa-miR-145-5p YES YES NO hsa-miR-15a-5p YES NO YES hsa-miR-15b-5p YES NO YES hsa-miR-16-5p YES NO YES hsa-miR-181a-5p YES NO YES hsa-miR-181b-5p YES NO YES hsa-miR-181c-5p YES NO YES hsa-miR-181d-5p YES NO YES hsa-miR-185-5p YES YES NO hsa-miR-195-5p YES NO YES hsa-miR-205-5p YES YES YES hsa-miR-206 YES YES NO hsa-miR-300 YES YES NO hsa-miR-324-5p YES YES NO hsa-miR-371a-5p YES YES YES hsa-miR-381-3p YES YES NO hsa-miR-424-5p YES NO YES hsa-miR-494-3p YES YES YES hsa-miR-495-3p YES YES NO hsa-miR-497-5p YES NO YES hsa-miR-582-5p YES NO YES hsa-miR-613 YES YES NO hsa-miR-873-5p YES YES NO hsa-miR-9-5p YES NO YES Display: