ctcRbase

Entry Detail

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General Information

Database ID: SKCM08989 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: MEF2D Full Name: myocyte enhancer factor 2D Category: mRNA Synonyms: - Chromosome: chr1 Strand: - Coordinate: Start Site(bp): 156463727 End Site(bp): 156500828 Gene Summary: This gene is a member of the myocyte-specific enhancer factor 2 (MEF2) family of transcription factors. Members of this family are involved in control of muscle and neuronal cell differentiation and development, and are regulated by class II histone deacetylases. Fusions of the encoded protein with Deleted in Azoospermia-Associated Protein 1 (DAZAP1) due to a translocation have been found in an acute lymphoblastic leukemia cell line, suggesting a role in leukemogenesis. The encoded protein may also be involved in Parkinson disease and myotonic dystrophy. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Oct 2012] External Links: Ensembl ID: ENSG00000116604 HGNC ID: HGNC:6997 Entrez Gene: 4209

Expression Profile of MEF2D Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-let-7a-5p YES NO YES hsa-let-7b-5p YES NO YES hsa-let-7c-5p YES NO YES hsa-let-7d-5p YES NO YES hsa-let-7e-5p YES NO YES hsa-let-7f-5p YES NO YES hsa-let-7g-5p YES NO YES hsa-let-7i-5p YES NO YES hsa-miR-101-3p YES NO YES hsa-miR-103a-3p YES YES YES hsa-miR-107 YES YES YES hsa-miR-1197 YES NO YES hsa-miR-1271-5p YES NO YES hsa-miR-144-3p YES NO YES hsa-miR-182-5p YES YES YES hsa-miR-18a-5p YES YES YES hsa-miR-18b-5p YES YES YES hsa-miR-199a-5p YES NO YES hsa-miR-199b-5p YES NO YES hsa-miR-19a-3p YES NO YES hsa-miR-19b-3p YES NO YES hsa-miR-216a-5p YES YES YES hsa-miR-216b-5p YES NO YES hsa-miR-218-5p YES NO YES hsa-miR-219a-5p YES NO YES hsa-miR-223-3p YES YES YES hsa-miR-25-3p YES YES YES hsa-miR-299-3p YES YES NO hsa-miR-30a-5p YES NO YES hsa-miR-30b-5p YES NO YES hsa-miR-30c-5p YES NO YES hsa-miR-30d-5p YES NO YES hsa-miR-30e-5p YES NO YES hsa-miR-324-5p YES NO YES hsa-miR-32-5p YES YES YES hsa-miR-329-3p YES NO NO hsa-miR-335-5p YES NO YES hsa-miR-342-3p YES YES NO hsa-miR-362-3p YES NO NO hsa-miR-363-3p YES YES YES hsa-miR-365a-3p YES YES YES hsa-miR-367-3p YES YES YES hsa-miR-369-3p YES NO NO hsa-miR-374a-5p YES YES NO hsa-miR-374b-5p YES YES NO hsa-miR-378a-3p YES NO YES hsa-miR-410-3p YES YES NO hsa-miR-421 YES YES YES hsa-miR-422a YES NO YES hsa-miR-423-5p YES NO NO hsa-miR-451a YES NO YES hsa-miR-485-5p YES NO YES hsa-miR-505-3p YES NO YES hsa-miR-541-3p YES NO NO hsa-miR-582-5p YES NO YES hsa-miR-654-5p YES NO NO hsa-miR-92a-3p YES YES YES hsa-miR-92b-3p YES YES YES hsa-miR-96-5p YES NO YES hsa-miR-98-5p YES NO YES Display: