ctcRbase

Entry Detail

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General Information

Database ID: SKCM09004 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: FXYD3 Full Name: FXYD domain containing ion transport regulator 3 Category: mRNA Synonyms: MAT8|PLML Chromosome: chr19 Strand: + Coordinate: Start Site(bp): 35115879 End Site(bp): 35124324 Gene Summary: This gene belongs to a small family of FXYD-domain containing regulators of Na+/K+ ATPases which share a 35-amino acid signature sequence domain, beginning with the sequence PFXYD, and containing 7 invariant and 6 highly conserved amino acids. This gene encodes a cell membrane protein that may regulate the function of ion-pumps and ion-channels. This gene may also play a role in tumor progression. Alternative splicing results in multiple transcript variants encoding distinct isoforms.[provided by RefSeq, Oct 2008] External Links: Ensembl ID: ENSG00000089356 HGNC ID: HGNC:4027 Entrez Gene: 5349

Expression Profile of FXYD3 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-1-3p YES YES NO hsa-miR-143-3p YES YES NO hsa-miR-199a-5p YES YES NO hsa-miR-199b-5p YES YES NO hsa-miR-206 YES YES NO hsa-miR-224-5p YES YES NO hsa-miR-342-3p YES YES YES hsa-miR-543 YES YES NO hsa-miR-613 YES YES NO Display: