ctcRbase

Entry Detail

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General Information

Database ID: SKCM09095 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: SMG8 Full Name: SMG8, nonsense mediated mRNA decay factor Category: mRNA Synonyms: C17orf71 Chromosome: chr17 Strand: + Coordinate: Start Site(bp): 59209400 End Site(bp): 59215247 Gene Summary: NA External Links: Ensembl ID: ENSG00000167447 HGNC ID: HGNC:25551 Entrez Gene: 55181

Expression Profile of SMG8 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-1297 YES YES NO hsa-miR-200b-3p YES YES YES hsa-miR-200c-3p YES YES YES hsa-miR-26a-5p YES YES NO hsa-miR-26b-5p YES YES NO hsa-miR-30a-5p YES YES NO hsa-miR-30b-5p YES YES NO hsa-miR-30c-5p YES YES NO hsa-miR-30d-5p YES YES NO hsa-miR-30e-5p YES YES NO hsa-miR-374b-5p YES YES NO hsa-miR-382-5p YES YES NO hsa-miR-410-3p YES YES NO hsa-miR-411-5p YES YES NO hsa-miR-421 YES YES NO hsa-miR-429 YES YES YES hsa-miR-495-3p YES YES NO Display: