ctcRbase

Entry Detail

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General Information

Database ID: SKCM09283 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: FBXO21 Full Name: F-box protein 21 Category: mRNA Synonyms: FBX21 Chromosome: chr12 Strand: - Coordinate: Start Site(bp): 117141988 End Site(bp): 117190531 Gene Summary: This gene encodes a member of the F-box protein family which is characterized by an approximately 40 amino acid motif, the F-box. The F-box proteins constitute one of the four subunits of ubiquitin protein ligase complex called SCFs (SKP1-cullin-F-box), which function in phosphorylation-dependent ubiquitination. The F-box proteins are divided into 3 classes: Fbws containing WD-40 domains, Fbls containing leucine-rich repeats, and Fbxs containing either different protein-protein interaction modules or no recognizable motifs. The protein encoded by this gene belongs to the Fbxs class. Alternative splicing of this gene generates 2 transcript variants. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000135108 HGNC ID: HGNC:13592 Entrez Gene: 23014

Expression Profile of FBXO21 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-103a-3p YES NO NO hsa-miR-106a-5p YES YES YES hsa-miR-106b-5p YES YES YES hsa-miR-107 YES NO NO hsa-miR-1271-5p YES YES NO hsa-miR-128-3p YES YES YES hsa-miR-132-3p YES YES YES hsa-miR-140-3p YES NO YES hsa-miR-142-3p YES YES YES hsa-miR-142-5p YES NO YES hsa-miR-150-5p YES YES NO hsa-miR-15a-5p YES YES YES hsa-miR-15b-5p YES YES YES hsa-miR-16-5p YES NO YES hsa-miR-17-5p YES YES YES hsa-miR-182-5p YES YES NO hsa-miR-186-5p YES YES NO hsa-miR-195-5p YES YES YES hsa-miR-197-3p YES YES NO hsa-miR-200b-3p YES YES NO hsa-miR-200c-3p YES YES NO hsa-miR-20a-5p YES YES YES hsa-miR-20b-5p YES YES YES hsa-miR-212-3p YES YES YES hsa-miR-214-3p YES NO NO hsa-miR-217 YES YES NO hsa-miR-24-3p YES YES NO hsa-miR-300 YES YES NO hsa-miR-30a-5p YES YES NO hsa-miR-30b-5p YES YES NO hsa-miR-30c-5p YES YES NO hsa-miR-30d-5p YES YES NO hsa-miR-30e-5p YES YES NO hsa-miR-340-5p YES YES YES hsa-miR-367-3p YES YES NO hsa-miR-377-3p YES YES NO hsa-miR-381-3p YES YES NO hsa-miR-382-5p YES YES NO hsa-miR-424-5p YES NO YES hsa-miR-429 YES YES NO hsa-miR-433-3p YES YES NO hsa-miR-497-5p YES NO YES hsa-miR-503-5p YES NO YES hsa-miR-519d-3p YES YES YES hsa-miR-543 YES YES YES hsa-miR-93-5p YES YES YES hsa-miR-96-5p YES YES NO Display: