ctcRbase
Gene expression database of circulating tumor cells/microemboli
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Entry Detail
General Information
Database ID:
SKCM09296
Cancer Type:
melanoma
Dataset:
GSE38495
CTCs/CTM Isolation Method:
immunomagnetic purification
Gene Information
ncRNA Symbol:
LYSMD2
Full Name:
LysM domain containing 2
Category:
mRNA
Synonyms:
-
Chromosome:
chr15
Strand:
-
Coordinate:
Start Site(bp):
51723011
End Site(bp):
51751585
Gene Summary:
NA
External Links:
Ensembl ID:
ENSG00000140280
HGNC ID:
HGNC:28571
Entrez Gene:
256586
Expression Profile of LYSMD2 Gene
 
Regulatory Relationship
mRNA targets:
NA
miRNA targets:
miRNA Name
PITA
miRanda
RNAhybrid
hsa-miR-130a-3p
YES
YES
YES
hsa-miR-130b-3p
YES
YES
YES
hsa-miR-148a-3p
YES
YES
YES
hsa-miR-148b-3p
YES
YES
YES
hsa-miR-152-3p
YES
YES
YES
hsa-miR-208a-3p
YES
YES
NO
hsa-miR-208b-3p
YES
YES
NO
hsa-miR-214-3p
YES
YES
NO
hsa-miR-23a-3p
YES
YES
NO
hsa-miR-23b-3p
YES
YES
NO
hsa-miR-25-3p
YES
YES
NO
hsa-miR-301a-3p
YES
YES
YES
hsa-miR-301b-3p
YES
YES
YES
hsa-miR-32-5p
YES
YES
NO
hsa-miR-340-5p
YES
YES
NO
hsa-miR-363-3p
YES
YES
NO
hsa-miR-367-3p
YES
YES
NO
hsa-miR-376c-3p
YES
YES
NO
hsa-miR-410-3p
YES
YES
NO
hsa-miR-454-3p
YES
YES
YES
hsa-miR-499a-5p
YES
YES
NO
hsa-miR-543
YES
YES
NO
hsa-miR-92a-3p
YES
YES
NO
hsa-miR-92b-3p
YES
YES
NO
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