ctcRbase

Entry Detail

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General Information

Database ID: SKCM09329 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: SERTAD3 Full Name: SERTA domain containing 3 Category: mRNA Synonyms: RBT1 Chromosome: chr19 Strand: - Coordinate: Start Site(bp): 40440844 End Site(bp): 40444705 Gene Summary: The protein encoded by this gene was identified in a yeast two-hybrid assay employing the second subunit of human replication protein A as bait. It is localized to the nucleus and its expression is significantly higher in cancer cell lines compared to normal cell lines. This protein has also been shown to be a strong transcriptional co-activator. Alternative splicing has been observed at this locus and two variants, both encoding the same protein, have been identified. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000167565 HGNC ID: HGNC:17931 Entrez Gene: 29946

Expression Profile of SERTAD3 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-124-3p YES YES YES hsa-miR-125a-5p YES YES YES hsa-miR-125b-5p YES YES YES hsa-miR-18a-5p YES YES NO hsa-miR-18b-5p YES YES NO hsa-miR-200b-3p YES YES NO hsa-miR-200c-3p YES YES NO hsa-miR-25-3p YES YES YES hsa-miR-27a-3p YES NO YES hsa-miR-27b-3p YES NO YES hsa-miR-32-5p YES YES YES hsa-miR-329-3p YES YES NO hsa-miR-339-5p YES YES NO hsa-miR-362-3p YES YES NO hsa-miR-363-3p YES YES YES hsa-miR-367-3p YES YES YES hsa-miR-429 YES YES NO hsa-miR-485-5p YES YES YES hsa-miR-490-3p YES YES NO hsa-miR-506-3p YES YES NO hsa-miR-7-5p YES YES YES hsa-miR-873-5p YES YES NO hsa-miR-92a-3p YES YES YES hsa-miR-92b-3p YES YES YES Display: