ctcRbase

Entry Detail

---



General Information

Database ID: SKCM09350 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: ATG4A Full Name: autophagy related 4A cysteine peptidase Category: mRNA Synonyms: APG4A|AUTL2 Chromosome: chrX Strand: + Coordinate: Start Site(bp): 108091668 End Site(bp): 108154671 Gene Summary: Autophagy is the process by which endogenous proteins and damaged organelles are destroyed intracellularly. Autophagy is postulated to be essential for cell homeostasis and cell remodeling during differentiation, metamorphosis, non-apoptotic cell death, and aging. Reduced levels of autophagy have been described in some malignant tumors, and a role for autophagy in controlling the unregulated cell growth linked to cancer has been proposed. This gene encodes a member of the autophagin protein family. The encoded protein is also designated as a member of the C-54 family of cysteine proteases. [provided by RefSeq, Mar 2016] External Links: Ensembl ID: ENSG00000101844 HGNC ID: HGNC:16489 Entrez Gene: 115201

Expression Profile of ATG4A Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-137 YES YES NO hsa-miR-182-5p YES YES NO hsa-miR-224-5p YES YES NO hsa-miR-24-3p YES YES YES hsa-miR-410-3p YES YES NO hsa-miR-421 YES YES NO hsa-miR-433-3p YES YES NO hsa-miR-495-3p YES YES NO hsa-miR-505-3p YES YES NO hsa-miR-542-3p YES YES YES hsa-miR-7-5p YES YES YES Display: