Entry Detail



General Information

Database ID:exR0017077
RNA Name:AAMDC
RNA Type:mRNA
Chromosome:chr11
Starnd:+
Coordinate:
Start Site(bp):77821109End Site(bp):77918432
External Links:ENSG00000087884



Disease Information

Disease Name:Trisomy 18 Syndrome
Disease Category:Congenital, Hereditary, and Neonatal Diseases and Abnormalities
MeSH ID:D000073842
Type:Diseases Category/Congenital, Hereditary, and Neonatal Diseases and Abnormalities
Alias:Trisomy 18 Syndromes//Trisomy E Syndrome//Complete Trisomy 18 Syndrome//Edwards Syndrome//Trisomy 18//Mosaic Trisomy 18 Syndrome



Expression Detail

GEO ID:GSE25634
Description:Expression profiles of amniotic fluid from human fetuses with Trisomy 18 and euploid controls
Experimental Design:Disease vs Control
Case Disease Type:Trisomy 18 Syndrome
Case Disease SubType:NA
Case Sample:Trisomy 18 Syndrome
Control Sample:Normal
Number of Case:5
Number of Control:6
Number of Samples:11





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ATF6B
chr6
32115264
32128253
-
BAZ2A
chr12
56595596
56636816
-
CALM3
chr19
46601074
46610782
+
EIF3L
chr22
37848868
37889407
+
HAPLN3
chr15
88877288
88895626
-
ILKAP
chr2
238170402
238203708
-
IMP4
chr2
130342877
130347967
+
LHPP
chr10
124461823
124617888
+
MTFR1L
chr1
25818640
25832942
+
RPL18
chr19
48615328
48619184
-
SH3GL1
chr19
4360370
4400547
-
TPM4
chr19
16067021
16103002
+
TTC17
chr11
43358920
43494933
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:NA
Display:



Experiment Detail

GEO ID:GSE25634
Sample Source:Amniotic Fluid
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:NA
RNA Extract protocol:RNA was extracted from 10 mL amniotic fluid supernatant with 30 mL TRIzol LS Reagent (Invitrogen, Carlsbad, CA) and 8 mL chloroform.
RNA library preparation protocol:biotin Samples were labeled using the FL-Ovation™ cDNA Biotin Module V2 (NuGEN, San Carlos, CA).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA