Entry Detail



General Information

Database ID:exR0017138
RNA Name:ABHD13
RNA Type:mRNA
Chromosome:chr13
Starnd:+
Coordinate:
Start Site(bp):108218392End Site(bp):108234243
External Links:ENSG00000139826



Disease Information

Disease Name:Trisomy 18 Syndrome
Disease Category:Congenital, Hereditary, and Neonatal Diseases and Abnormalities
MeSH ID:D000073842
Type:Diseases Category/Congenital, Hereditary, and Neonatal Diseases and Abnormalities
Alias:Trisomy 18 Syndromes//Trisomy E Syndrome//Complete Trisomy 18 Syndrome//Edwards Syndrome//Trisomy 18//Mosaic Trisomy 18 Syndrome



Expression Detail

GEO ID:GSE25634
Description:Expression profiles of amniotic fluid from human fetuses with Trisomy 18 and euploid controls
Experimental Design:Disease vs Control
Case Disease Type:Trisomy 18 Syndrome
Case Disease SubType:NA
Case Sample:Trisomy 18 Syndrome
Control Sample:Normal
Number of Case:5
Number of Control:6
Number of Samples:11





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ANKRD46
chr8
100509752
100559784
-
ARMT1
chr6
151452258
151470101
+
CCR7
chr17
40553769
40565472
-
CHIC1
chrX
73563200
73687102
+
CUL4A
chr13
113208193
113267108
+
HDAC2
chr6
113933028
114011308
-
HSPA4
chr5
133052013
133106449
+
IDH1
chr2
208236227
208266074
-
LIN28A
chr1
26410817
26429728
+
MRI1
chr19
13764522
13774282
+
MT-ND4
chrMT
10760
12137
+
PPM1G
chr2
27381195
27409591
-
RAB18
chr10
27504174
27542237
+
RAB7A
chr3
128726183
128814798
+
RCN2
chr15
76931738
76954393
+
RHEB
chr7
151466012
151520120
-
RHOT1
chr17
32142454
32253374
+
RNF138
chr18
32091874
32131561
+
SCAMP3
chr1
155255979
155262430
-
SSRP1
chr11
57325986
57335892
-
STIM2
chr4
26857601
27025381
+
SV2A
chr1
149903318
149917844
-
TRIP6
chr7
100867387
100873454
+
U2AF1
chr21
43092956
43107587
-
U2AF1L5
chr21
6484623
6499261
-
UBR4
chr1
19074510
19210266
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:NA
Display:



Experiment Detail

GEO ID:GSE25634
Sample Source:Amniotic Fluid
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:NA
RNA Extract protocol:RNA was extracted from 10 mL amniotic fluid supernatant with 30 mL TRIzol LS Reagent (Invitrogen, Carlsbad, CA) and 8 mL chloroform.
RNA library preparation protocol:biotin Samples were labeled using the FL-Ovation™ cDNA Biotin Module V2 (NuGEN, San Carlos, CA).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA