Entry Detail



General Information

Database ID:exR0017141
RNA Name:ABHD14B
RNA Type:mRNA
Chromosome:chr3
Starnd:-
Coordinate:
Start Site(bp):51968510End Site(bp):51983409
External Links:ENSG00000114779



Disease Information

Disease Name:Trisomy 18 Syndrome
Disease Category:Congenital, Hereditary, and Neonatal Diseases and Abnormalities
MeSH ID:D000073842
Type:Diseases Category/Congenital, Hereditary, and Neonatal Diseases and Abnormalities
Alias:Trisomy 18 Syndromes//Trisomy E Syndrome//Complete Trisomy 18 Syndrome//Edwards Syndrome//Trisomy 18//Mosaic Trisomy 18 Syndrome



Expression Detail

GEO ID:GSE25634
Description:Expression profiles of amniotic fluid from human fetuses with Trisomy 18 and euploid controls
Experimental Design:Disease vs Control
Case Disease Type:Trisomy 18 Syndrome
Case Disease SubType:NA
Case Sample:Trisomy 18 Syndrome
Control Sample:Normal
Number of Case:5
Number of Control:6
Number of Samples:11





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
FTL
chr19
48965309
48966879
+
SMARCD1
chr12
50085200
50100707
+
UTP3
chr4
70688532
70690551
+
RPL13A
chr19
49487554
49492308
+
NELFB
chr9
137255327
137273542
+
HLA-DPB1
chr6
33075990
33089696
+
RIC8A
chr11
207511
215113
+
GATD1
chr11
767220
777488
-
AC010422.3
chr19
12643831
12648397
-
RTCA
chr1
100266207
100292769
+
CCDC86
chr11
60842113
60851081
+
ZNF160
chr19
53066606
53103436
-
RHOA
chr3
49359145
49412998
-
RPL37
chr5
40825262
40835222
-
EEF2
chr19
3976056
3985463
-
RPS6
chr9
19375715
19380236
-
JOSD2
chr19
50505998
50511353
-
SSRP1
chr11
57325986
57335892
-
PABPC1
chr8
100685816
100722809
-
PCBP4
chr3
51957454
51974016
-
RABGEF1
chr7
66682164
66811464
+
GIMAP1-GIMAP5
chr7
150716668
150743646
+
NDUFA2
chr5
140638740
140647785
-
AGTPBP1
chr9
85546539
85742029
-
TRA2B
chr3
185914558
185938103
-
UGT8
chr4
114598770
114678225
+
VCL
chr10
73995193
74121363
+
SLC25A39
chr17
44319625
44324870
-
AC027644.4
chr7
66628958
66811189
+
DLX1
chr2
172084740
172089677
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-1286
chr22
20249145
20249165
-
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC115284.1
chr3
51961212
51974031
-
ZFAS1
chr20
49278178
49299600
+
Display:



Experiment Detail

GEO ID:GSE25634
Sample Source:Amniotic Fluid
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:NA
RNA Extract protocol:RNA was extracted from 10 mL amniotic fluid supernatant with 30 mL TRIzol LS Reagent (Invitrogen, Carlsbad, CA) and 8 mL chloroform.
RNA library preparation protocol:biotin Samples were labeled using the FL-Ovation™ cDNA Biotin Module V2 (NuGEN, San Carlos, CA).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA