Entry Detail



General Information

Database ID:exR0017145
RNA Name:ABHD17A
RNA Type:mRNA
Chromosome:chr19
Starnd:-
Coordinate:
Start Site(bp):1876810End Site(bp):1885547
External Links:ENSG00000129968



Disease Information

Disease Name:Trisomy 18 Syndrome
Disease Category:Congenital, Hereditary, and Neonatal Diseases and Abnormalities
MeSH ID:D000073842
Type:Diseases Category/Congenital, Hereditary, and Neonatal Diseases and Abnormalities
Alias:Trisomy 18 Syndromes//Trisomy E Syndrome//Complete Trisomy 18 Syndrome//Edwards Syndrome//Trisomy 18//Mosaic Trisomy 18 Syndrome



Expression Detail

GEO ID:GSE25634
Description:Expression profiles of amniotic fluid from human fetuses with Trisomy 18 and euploid controls
Experimental Design:Disease vs Control
Case Disease Type:Trisomy 18 Syndrome
Case Disease SubType:NA
Case Sample:Trisomy 18 Syndrome
Control Sample:Normal
Number of Case:5
Number of Control:6
Number of Samples:11





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
SLC20A2
chr8
42416475
42541926
-
PPP4R3A
chr14
91457611
91510554
-
AP001931.1
chr11
57741779
57804771
+
EFNB2
chr13
106489745
106535662
-
DNAJB1
chr19
14514769
14529770
-
RPS15
chr19
1438358
1440494
+
MSH5-SAPCD1
chr6
31740020
31764851
+
TUBB2A
chr6
3153666
3157544
-
NBEAL2
chr3
46979666
47009704
+
PRPF6
chr20
63981132
64033100
+
PIP5K1C
chr19
3630183
3700479
-
CEBPG
chr19
33373685
33382686
+
NAA16
chr13
41311267
41377030
+
SUPT5H
chr19
39436156
39476670
+
MT-CO2
chrMT
7586
8269
+
LUC7L2
chr7
139340359
139423457
+
AC091167.2
chr15
90249556
90272208
+
ELMO2
chr20
46366050
46432985
-
HNRNPH1
chr5
179614178
179634784
-
ACOT7
chr1
6264269
6394391
-
SETD5
chr3
9397615
9479240
+
ABHD17C
chr15
80679684
80755621
+
GPX4
chr19
1103926
1106791
+
EIF5
chr14
103333544
103345025
+
NUB1
chr7
151341699
151378449
+
FGFR1
chr8
38400215
38468834
-
NF2
chr22
29603556
29698598
+
RBCK1
chr20
407498
430966
+
UPF1
chr19
18831938
18868236
+
SLC25A3
chr12
98593591
98606379
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:NA
Display:



Experiment Detail

GEO ID:GSE25634
Sample Source:Amniotic Fluid
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:NA
RNA Extract protocol:RNA was extracted from 10 mL amniotic fluid supernatant with 30 mL TRIzol LS Reagent (Invitrogen, Carlsbad, CA) and 8 mL chloroform.
RNA library preparation protocol:biotin Samples were labeled using the FL-Ovation™ cDNA Biotin Module V2 (NuGEN, San Carlos, CA).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA