Entry Detail



General Information

Database ID:exR0017149
RNA Name:ABHD3
RNA Type:mRNA
Chromosome:chr18
Starnd:-
Coordinate:
Start Site(bp):21650901End Site(bp):21704780
External Links:ENSG00000158201



Disease Information

Disease Name:Trisomy 18 Syndrome
Disease Category:Congenital, Hereditary, and Neonatal Diseases and Abnormalities
MeSH ID:D000073842
Type:Diseases Category/Congenital, Hereditary, and Neonatal Diseases and Abnormalities
Alias:Trisomy 18 Syndromes//Trisomy E Syndrome//Complete Trisomy 18 Syndrome//Edwards Syndrome//Trisomy 18//Mosaic Trisomy 18 Syndrome



Expression Detail

GEO ID:GSE25634
Description:Expression profiles of amniotic fluid from human fetuses with Trisomy 18 and euploid controls
Experimental Design:Disease vs Control
Case Disease Type:Trisomy 18 Syndrome
Case Disease SubType:NA
Case Sample:Trisomy 18 Syndrome
Control Sample:Normal
Number of Case:5
Number of Control:6
Number of Samples:11





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ELOB
chr16
2771414
2777297
-
FP565260.3
chr21
5022493
5040666
+
HNRNPK
chr9
83968083
83980616
-
ICOSLG
chr21
44217014
44240966
-
IRGQ
chr19
43584369
43596135
-
MTRNR2L12
chr3
96617188
96618236
-
NAA10
chrX
153929225
153935080
-
NOP53
chr19
47745546
47757058
+
ORC4
chr2
147930397
148021604
-
PEG10
chr7
94656325
94669695
+
POU3F3
chr2
104853287
104858574
+
RPL3
chr22
39312882
39320389
-
SATB2
chr2
199269500
199471266
-
SOS2
chr14
50117130
50231578
-
ZNF653
chr19
11483427
11505839
-
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-3654
chr7
133034860
133034878
-
circRNA targets:NA
lncRNA targets:NA
Display:



Experiment Detail

GEO ID:GSE25634
Sample Source:Amniotic Fluid
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:NA
RNA Extract protocol:RNA was extracted from 10 mL amniotic fluid supernatant with 30 mL TRIzol LS Reagent (Invitrogen, Carlsbad, CA) and 8 mL chloroform.
RNA library preparation protocol:biotin Samples were labeled using the FL-Ovation™ cDNA Biotin Module V2 (NuGEN, San Carlos, CA).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA