Entry Detail



General Information

Database ID:exR0017173
RNA Name:ACACB
RNA Type:mRNA
Chromosome:chr12
Starnd:+
Coordinate:
Start Site(bp):109116595End Site(bp):109268226
External Links:ENSG00000076555



Disease Information

Disease Name:Trisomy 18 Syndrome
Disease Category:Congenital, Hereditary, and Neonatal Diseases and Abnormalities
MeSH ID:D000073842
Type:Diseases Category/Congenital, Hereditary, and Neonatal Diseases and Abnormalities
Alias:Trisomy 18 Syndromes//Trisomy E Syndrome//Complete Trisomy 18 Syndrome//Edwards Syndrome//Trisomy 18//Mosaic Trisomy 18 Syndrome



Expression Detail

GEO ID:GSE25634
Description:Expression profiles of amniotic fluid from human fetuses with Trisomy 18 and euploid controls
Experimental Design:Disease vs Control
Case Disease Type:Trisomy 18 Syndrome
Case Disease SubType:NA
Case Sample:Trisomy 18 Syndrome
Control Sample:Normal
Number of Case:5
Number of Control:6
Number of Samples:11





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
CALM1
chr14
90396502
90408268
+
CARM1
chr19
10871513
10923070
+
EEA1
chr12
92770637
92929331
-
GATAD2B
chr1
153789030
153923360
-
HDLBP
chr2
241227264
241317061
-
IQGAP1
chr15
90388242
90502239
+
LGMN
chr14
92703807
92748679
-
MAEA
chr4
1289887
1340147
+
MAPK3
chr16
30114105
30123506
-
MMAB
chr12
109553715
109573580
-
MRPL22
chr5
154941073
154969411
+
NRIP1
chr21
14961235
15065936
-
NUFIP2
chr17
29255839
29294148
-
PKM
chr15
72199029
72231822
-
PVR
chr19
44643798
44666162
+
SLC16A1
chr1
112911847
112957013
-
TIMP3
chr22
32801701
32863043
+
TPX2
chr20
31739271
31801805
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC007637.1
chr12
109111218
109125594
+
Display:



Experiment Detail

GEO ID:GSE25634
Sample Source:Amniotic Fluid
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:NA
RNA Extract protocol:RNA was extracted from 10 mL amniotic fluid supernatant with 30 mL TRIzol LS Reagent (Invitrogen, Carlsbad, CA) and 8 mL chloroform.
RNA library preparation protocol:biotin Samples were labeled using the FL-Ovation™ cDNA Biotin Module V2 (NuGEN, San Carlos, CA).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA