Entry Detail



General Information

Database ID:exR0017174
RNA Name:ACAD10
RNA Type:mRNA
Chromosome:chr12
Starnd:+
Coordinate:
Start Site(bp):111686056End Site(bp):111757107
External Links:ENSG00000111271



Disease Information

Disease Name:Trisomy 18 Syndrome
Disease Category:Congenital, Hereditary, and Neonatal Diseases and Abnormalities
MeSH ID:D000073842
Type:Diseases Category/Congenital, Hereditary, and Neonatal Diseases and Abnormalities
Alias:Trisomy 18 Syndromes//Trisomy E Syndrome//Complete Trisomy 18 Syndrome//Edwards Syndrome//Trisomy 18//Mosaic Trisomy 18 Syndrome



Expression Detail

GEO ID:GSE25634
Description:Expression profiles of amniotic fluid from human fetuses with Trisomy 18 and euploid controls
Experimental Design:Disease vs Control
Case Disease Type:Trisomy 18 Syndrome
Case Disease SubType:NA
Case Sample:Trisomy 18 Syndrome
Control Sample:Normal
Number of Case:5
Number of Control:6
Number of Samples:11





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
NDUFA10
chr2
239892450
240025345
-
GPCPD1
chr20
5544439
5611006
-
IPP
chr1
45694324
45750653
-
MRM2
chr7
2234195
2242205
-
SLAMF6
chr1
160485030
160523262
-
MYH9
chr22
36281277
36388067
-
SLC52A2
chr8
144354135
144361272
+
CPT1C
chr19
49690898
49713731
+
PSMD11
chr17
32444379
32483319
+
HMGB2
chr4
173331376
173334432
-
SP110
chr2
230167293
230225729
-
CBX3
chr7
26201162
26213607
+
DNAJC25
chr9
111631334
111654351
+
PTP4A3
chr8
141391995
141432454
+
CMTR1
chr6
37433219
37482827
+
PLXNA1
chr3
126988594
127037392
+
ZBED4
chr22
49853844
49890080
+
ST8SIA1
chr12
22063773
22437041
-
ACTN1
chr14
68874143
68979440
-
UBE2Z
chr17
48908407
48929056
+
GRK2
chr11
67266473
67286556
+
DCTN2
chr12
57530102
57547331
-
FOXM1
chr12
2857681
2877155
-
MT-ND1
chrMT
3307
4262
+
VIPAS39
chr14
77426675
77457952
-
EPM2AIP1
chr3
36985043
36993131
-
ST6GAL1
chr3
186930502
187078553
+
TPGS2
chr18
36777647
36829216
-
AL132780.3
chr14
22946270
22982258
-
FSCN3
chr7
127591409
127602144
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:NA
Display:



Experiment Detail

GEO ID:GSE25634
Sample Source:Amniotic Fluid
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:NA
RNA Extract protocol:RNA was extracted from 10 mL amniotic fluid supernatant with 30 mL TRIzol LS Reagent (Invitrogen, Carlsbad, CA) and 8 mL chloroform.
RNA library preparation protocol:biotin Samples were labeled using the FL-Ovation™ cDNA Biotin Module V2 (NuGEN, San Carlos, CA).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA