Entry Detail



General Information

Database ID:exR0017181
RNA Name:ACADSB
RNA Type:mRNA
Chromosome:chr10
Starnd:+
Coordinate:
Start Site(bp):123008979End Site(bp):123058290
External Links:ENSG00000196177



Disease Information

Disease Name:Trisomy 18 Syndrome
Disease Category:Congenital, Hereditary, and Neonatal Diseases and Abnormalities
MeSH ID:D000073842
Type:Diseases Category/Congenital, Hereditary, and Neonatal Diseases and Abnormalities
Alias:Trisomy 18 Syndromes//Trisomy E Syndrome//Complete Trisomy 18 Syndrome//Edwards Syndrome//Trisomy 18//Mosaic Trisomy 18 Syndrome



Expression Detail

GEO ID:GSE25634
Description:Expression profiles of amniotic fluid from human fetuses with Trisomy 18 and euploid controls
Experimental Design:Disease vs Control
Case Disease Type:Trisomy 18 Syndrome
Case Disease SubType:NA
Case Sample:Trisomy 18 Syndrome
Control Sample:Normal
Number of Case:5
Number of Control:6
Number of Samples:11





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
B2M
chr15
44711487
44718877
+
B4GAT1
chr11
66345374
66347629
-
BUB3
chr10
123154402
123170467
+
C11orf58
chr11
16613132
16758340
+
CCND2
chr12
4273762
4305353
+
COX18
chr4
73052362
73069755
-
DDX24
chr14
94048287
94081212
-
DHCR24
chr1
54849627
54887195
-
EIF4E
chr4
98871684
98930637
-
HLA-B
chr6
31269491
31357188
-
MCFD2
chr2
46901870
46941855
-
MICB
chr6
31494881
31511124
+
NCOR1
chr17
16029157
16218185
-
NFATC3
chr16
68084751
68229259
+
NOP53
chr19
47745546
47757058
+
POGK
chr1
166839447
166856344
+
POLE3
chr9
113407235
113410675
-
RFFL
chr17
35005990
35089319
-
TPT1
chr13
45333471
45341370
-
VMP1
chr17
59707192
59842255
+
YWHAE
chr17
1344275
1400222
-
YWHAQ
chr2
9583967
9630997
-
ZNF100
chr19
21722771
21767579
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:NA
Display:



Experiment Detail

GEO ID:GSE25634
Sample Source:Amniotic Fluid
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:NA
RNA Extract protocol:RNA was extracted from 10 mL amniotic fluid supernatant with 30 mL TRIzol LS Reagent (Invitrogen, Carlsbad, CA) and 8 mL chloroform.
RNA library preparation protocol:biotin Samples were labeled using the FL-Ovation™ cDNA Biotin Module V2 (NuGEN, San Carlos, CA).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA