Entry Detail



General Information

Database ID:exR0017190
RNA Name:ACBD4
RNA Type:mRNA
Chromosome:chr17
Starnd:+
Coordinate:
Start Site(bp):45132600End Site(bp):45144181
External Links:ENSG00000181513



Disease Information

Disease Name:Trisomy 18 Syndrome
Disease Category:Congenital, Hereditary, and Neonatal Diseases and Abnormalities
MeSH ID:D000073842
Type:Diseases Category/Congenital, Hereditary, and Neonatal Diseases and Abnormalities
Alias:Trisomy 18 Syndromes//Trisomy E Syndrome//Complete Trisomy 18 Syndrome//Edwards Syndrome//Trisomy 18//Mosaic Trisomy 18 Syndrome



Expression Detail

GEO ID:GSE25634
Description:Expression profiles of amniotic fluid from human fetuses with Trisomy 18 and euploid controls
Experimental Design:Disease vs Control
Case Disease Type:Trisomy 18 Syndrome
Case Disease SubType:NA
Case Sample:Trisomy 18 Syndrome
Control Sample:Normal
Number of Case:5
Number of Control:6
Number of Samples:11





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ANP32A
chr15
68778535
68820897
-
BSG
chr19
571277
583493
+
CCDC6
chr10
59788747
59906556
-
CDON
chr11
125955796
126063335
-
DYNLL2
chr17
58083419
58095542
+
EIF3C
chr16
28688558
28735730
+
ENO1
chr1
8861000
8879190
-
GAPDH
chr12
6534512
6538374
+
GATAD1
chr7
92447482
92460075
+
HPN
chr19
35040506
35066571
+
KAT7
chr17
49788681
49835026
+
LIN28A
chr1
26410817
26429728
+
LRP4
chr11
46856717
46918642
-
MAD2L2
chr1
11674480
11691650
-
PDE4D
chr5
58969038
60522120
-
PDHB
chr3
58427630
58433857
-
PPP6R1
chr19
55229779
55259017
-
SCAND1
chr20
35953617
35959472
-
TMA16
chr4
163494442
163520539
+
TPM3
chr1
154155304
154194648
-
TPRN
chr9
137191617
137204193
-
TSR1
chr17
2322396
2336657
-
TUBA1B
chr12
49127782
49131397
-
USP39
chr2
85602856
85649283
+
VPS26C
chr21
37223420
37267919
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC027290.2
chr12
122865335
122867021
+
Display:



Experiment Detail

GEO ID:GSE25634
Sample Source:Amniotic Fluid
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:NA
RNA Extract protocol:RNA was extracted from 10 mL amniotic fluid supernatant with 30 mL TRIzol LS Reagent (Invitrogen, Carlsbad, CA) and 8 mL chloroform.
RNA library preparation protocol:biotin Samples were labeled using the FL-Ovation™ cDNA Biotin Module V2 (NuGEN, San Carlos, CA).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA