Entry Detail



General Information

Database ID:exR0017199
RNA Name:ACHE
RNA Type:mRNA
Chromosome:chr7
Starnd:-
Coordinate:
Start Site(bp):100889994End Site(bp):100896974
External Links:ENSG00000087085



Disease Information

Disease Name:Trisomy 18 Syndrome
Disease Category:Congenital, Hereditary, and Neonatal Diseases and Abnormalities
MeSH ID:D000073842
Type:Diseases Category/Congenital, Hereditary, and Neonatal Diseases and Abnormalities
Alias:Trisomy 18 Syndromes//Trisomy E Syndrome//Complete Trisomy 18 Syndrome//Edwards Syndrome//Trisomy 18//Mosaic Trisomy 18 Syndrome



Expression Detail

GEO ID:GSE25634
Description:Expression profiles of amniotic fluid from human fetuses with Trisomy 18 and euploid controls
Experimental Design:Disease vs Control
Case Disease Type:Trisomy 18 Syndrome
Case Disease SubType:NA
Case Sample:Trisomy 18 Syndrome
Control Sample:Normal
Number of Case:5
Number of Control:6
Number of Samples:11





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
CPNE2
chr16
57092583
57148369
+
GNAI2
chr3
50226292
50259362
+
GOLGA7
chr8
41490396
41510980
+
GORASP1
chr3
39096659
39108363
-
HLA-A
chr6
29941260
29945884
+
PCDHGA1
chr5
141330571
141512981
+
PCDHGA10
chr5
141412987
141512979
+
PCDHGA11
chr5
141421047
141512975
+
PCDHGA12
chr5
141430507
141512975
+
PCDHGA2
chr5
141338760
141512975
+
PCDHGA3
chr5
141343829
141512979
+
PCDHGA4
chr5
141355021
141512975
+
PCDHGA5
chr5
141364232
141512979
+
PCDHGA6
chr5
141373914
141512979
+
PCDHGA7
chr5
141382739
141512975
+
PCDHGA8
chr5
141390157
141512979
+
PCDHGA9
chr5
141402932
141512979
+
PCDHGB1
chr5
141350102
141512979
+
PCDHGB2
chr5
141360042
141512979
+
PCDHGB3
chr5
141370242
141512975
+
PCDHGB4
chr5
141387698
141512979
+
PCDHGB5
chr5
141397987
141512979
+
PCDHGB6
chr5
141408021
141512979
+
PCDHGB7
chr5
141417645
141512979
+
PCDHGC3
chr5
141475947
141512977
+
PCDHGC4
chr5
141484997
141512979
+
PCDHGC5
chr5
141489121
141512979
+
PLD3
chr19
40348456
40380439
+
UBQLN1
chr9
83659968
83707958
-
UQCRHL
chr1
15807169
15809348
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:NA
Display:



Experiment Detail

GEO ID:GSE25634
Sample Source:Amniotic Fluid
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:NA
RNA Extract protocol:RNA was extracted from 10 mL amniotic fluid supernatant with 30 mL TRIzol LS Reagent (Invitrogen, Carlsbad, CA) and 8 mL chloroform.
RNA library preparation protocol:biotin Samples were labeled using the FL-Ovation™ cDNA Biotin Module V2 (NuGEN, San Carlos, CA).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA