Entry Detail



General Information

Database ID:exR0017222
RNA Name:ACOXL
RNA Type:mRNA
Chromosome:chr2
Starnd:+
Coordinate:
Start Site(bp):110732573End Site(bp):111118222
External Links:ENSG00000153093



Disease Information

Disease Name:Trisomy 18 Syndrome
Disease Category:Congenital, Hereditary, and Neonatal Diseases and Abnormalities
MeSH ID:D000073842
Type:Diseases Category/Congenital, Hereditary, and Neonatal Diseases and Abnormalities
Alias:Trisomy 18 Syndromes//Trisomy E Syndrome//Complete Trisomy 18 Syndrome//Edwards Syndrome//Trisomy 18//Mosaic Trisomy 18 Syndrome



Expression Detail

GEO ID:GSE25634
Description:Expression profiles of amniotic fluid from human fetuses with Trisomy 18 and euploid controls
Experimental Design:Disease vs Control
Case Disease Type:Trisomy 18 Syndrome
Case Disease SubType:NA
Case Sample:Trisomy 18 Syndrome
Control Sample:Normal
Number of Case:5
Number of Control:6
Number of Samples:11





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
BASP1
chr5
17065598
17276843
+
CTSA
chr20
45890144
45898820
+
DAG1
chr3
49468703
49535618
+
FBXO22
chr15
75903876
75942511
+
LCK
chr1
32251239
32286165
+
NAV1
chr1
201622885
201826969
+
OXLD1
chr17
81665036
81666635
-
PFN1
chr17
4945652
4949061
-
RHBDD2
chr7
75842602
75888926
+
RNF213
chr17
80260866
80398786
+
SBF1
chr22
50445000
50475035
-
SSTR3
chr22
37204237
37212477
-
TM9SF4
chr20
32109714
32167258
+
ZNF106
chr15
42412823
42491141
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:NA
Display:



Experiment Detail

GEO ID:GSE25634
Sample Source:Amniotic Fluid
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:NA
RNA Extract protocol:RNA was extracted from 10 mL amniotic fluid supernatant with 30 mL TRIzol LS Reagent (Invitrogen, Carlsbad, CA) and 8 mL chloroform.
RNA library preparation protocol:biotin Samples were labeled using the FL-Ovation™ cDNA Biotin Module V2 (NuGEN, San Carlos, CA).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA