Entry Detail



General Information

Database ID:exR0017226
RNA Name:ACPP
RNA Type:mRNA
Chromosome:chr3
Starnd:+
Coordinate:
Start Site(bp):132317369End Site(bp):132368298
External Links:ENSG00000014257



Disease Information

Disease Name:Trisomy 18 Syndrome
Disease Category:Congenital, Hereditary, and Neonatal Diseases and Abnormalities
MeSH ID:D000073842
Type:Diseases Category/Congenital, Hereditary, and Neonatal Diseases and Abnormalities
Alias:Trisomy 18 Syndromes//Trisomy E Syndrome//Complete Trisomy 18 Syndrome//Edwards Syndrome//Trisomy 18//Mosaic Trisomy 18 Syndrome



Expression Detail

GEO ID:GSE25634
Description:Expression profiles of amniotic fluid from human fetuses with Trisomy 18 and euploid controls
Experimental Design:Disease vs Control
Case Disease Type:Trisomy 18 Syndrome
Case Disease SubType:NA
Case Sample:Trisomy 18 Syndrome
Control Sample:Normal
Number of Case:5
Number of Control:6
Number of Samples:11





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC120057.2
chr17
7240427
7244635
-
ADGRA3
chr4
22345071
22516066
-
AGTRAP
chr1
11736084
11754802
+
CHTOP
chr1
153633982
153646306
+
CLCN3
chr4
169612633
169723673
+
G3BP1
chr5
151771045
151812785
+
GABARAP
chr17
7240008
7242449
-
LZIC
chr1
9922113
9943407
-
NUDT16L1
chr16
4693694
4695859
+
OTUD5
chrX
48922028
48958386
-
PPIA
chr7
44796680
44824564
+
RPL13
chr16
89560657
89566828
+
RPL14
chr3
40457292
40468587
+
SAFB
chr19
5623035
5668478
+
SRSF1
chr17
58000919
58007346
-
STC2
chr5
173314713
173329503
-
TFG
chr3
100709331
100748964
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:NA
Display:



Experiment Detail

GEO ID:GSE25634
Sample Source:Amniotic Fluid
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:NA
RNA Extract protocol:RNA was extracted from 10 mL amniotic fluid supernatant with 30 mL TRIzol LS Reagent (Invitrogen, Carlsbad, CA) and 8 mL chloroform.
RNA library preparation protocol:biotin Samples were labeled using the FL-Ovation™ cDNA Biotin Module V2 (NuGEN, San Carlos, CA).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA