Entry Detail



General Information

Database ID:exR0017232
RNA Name:ACSF2
RNA Type:mRNA
Chromosome:chr17
Starnd:+
Coordinate:
Start Site(bp):50426158End Site(bp):50474845
External Links:ENSG00000167107



Disease Information

Disease Name:Trisomy 18 Syndrome
Disease Category:Congenital, Hereditary, and Neonatal Diseases and Abnormalities
MeSH ID:D000073842
Type:Diseases Category/Congenital, Hereditary, and Neonatal Diseases and Abnormalities
Alias:Trisomy 18 Syndromes//Trisomy E Syndrome//Complete Trisomy 18 Syndrome//Edwards Syndrome//Trisomy 18//Mosaic Trisomy 18 Syndrome



Expression Detail

GEO ID:GSE25634
Description:Expression profiles of amniotic fluid from human fetuses with Trisomy 18 and euploid controls
Experimental Design:Disease vs Control
Case Disease Type:Trisomy 18 Syndrome
Case Disease SubType:NA
Case Sample:Trisomy 18 Syndrome
Control Sample:Normal
Number of Case:5
Number of Control:6
Number of Samples:11





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC006030.1
chr2
74211604
74363377
-
AP4E1
chr15
50908672
51005895
+
ARF5
chr7
127588386
127591700
+
C11orf49
chr11
46936689
47164385
+
COX10
chr17
14069490
14231736
+
CPNE5
chr6
36740775
36839444
-
DCTN1
chr2
74361154
74392087
-
EIF4B
chr12
53006158
53042209
+
FSCN3
chr7
127591409
127602144
+
GGA2
chr16
23463542
23521995
-
GSTP1
chr11
67583742
67586656
+
HSPA9
chr5
138553756
138575416
-
IARS2
chr1
220094132
220148041
+
MEF2A
chr15
99565417
99716466
+
PARP1
chr1
226360691
226408093
-
PIP5K1A
chr1
151197949
151249536
+
RPL3
chr22
39312882
39320389
-
RPS12
chr6
132814569
132817564
+
SCOC
chr4
140257286
140385726
+
SEMA6B
chr19
4542593
4559684
-
TMBIM6
chr12
49707725
49764934
+
UBA2
chr19
34428352
34471251
+
UBE2A
chrX
119574536
119591083
+
YPEL3
chr16
30092314
30096915
-
ZNF219
chr14
21090077
21104722
-
ZNF785
chr16
30573740
30585769
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
CCDC144NL-AS1
chr17
20868433
21002276
+
Display:



Experiment Detail

GEO ID:GSE25634
Sample Source:Amniotic Fluid
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:NA
RNA Extract protocol:RNA was extracted from 10 mL amniotic fluid supernatant with 30 mL TRIzol LS Reagent (Invitrogen, Carlsbad, CA) and 8 mL chloroform.
RNA library preparation protocol:biotin Samples were labeled using the FL-Ovation™ cDNA Biotin Module V2 (NuGEN, San Carlos, CA).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA