Entry Detail



General Information

Database ID:exR0017244
RNA Name:ACSS1
RNA Type:mRNA
Chromosome:chr20
Starnd:-
Coordinate:
Start Site(bp):25006230End Site(bp):25058980
External Links:ENSG00000154930



Disease Information

Disease Name:Trisomy 18 Syndrome
Disease Category:Congenital, Hereditary, and Neonatal Diseases and Abnormalities
MeSH ID:D000073842
Type:Diseases Category/Congenital, Hereditary, and Neonatal Diseases and Abnormalities
Alias:Trisomy 18 Syndromes//Trisomy E Syndrome//Complete Trisomy 18 Syndrome//Edwards Syndrome//Trisomy 18//Mosaic Trisomy 18 Syndrome



Expression Detail

GEO ID:GSE25634
Description:Expression profiles of amniotic fluid from human fetuses with Trisomy 18 and euploid controls
Experimental Design:Disease vs Control
Case Disease Type:Trisomy 18 Syndrome
Case Disease SubType:NA
Case Sample:Trisomy 18 Syndrome
Control Sample:Normal
Number of Case:5
Number of Control:6
Number of Samples:11





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
CTSB
chr8
11842524
11869448
-
RPL13
chr16
89560657
89566828
+
RPL3
chr22
39312882
39320389
-
MX1
chr21
41420304
41459214
+
MKI67
chr10
128096659
128126423
-
PTK2B
chr8
27311482
27459391
+
CLPTM1L
chr5
1317752
1345099
-
DIMT1
chr5
62347284
62403939
-
LCP1
chr13
46125920
46211871
-
CD79A
chr19
41877279
41881372
+
CMC4
chrX
155061622
155071136
-
PHC3
chr3
170086732
170181749
-
SASH3
chrX
129779949
129795201
+
PAICS
chr4
56435741
56464579
+
PGM2
chr4
37826660
37862937
+
MTRNR2L8
chr11
10507894
10509186
-
AC092073.1
chr19
34396315
34409364
+
ARL6IP6
chr2
152717893
152761253
+
RPS29
chr14
49570984
49599164
-
MTCP1
chrX
155064034
155147937
-
GPI
chr19
34359480
34402413
+
CASP8
chr2
201233443
201287711
+
MSL3
chrX
11758159
11775772
+
EEF2
chr19
3976056
3985463
-
SFPQ
chr1
35176378
35193145
-
TNFRSF14
chr1
2555639
2565382
+
ACAD8
chr11
134253495
134265855
+
RPL14
chr3
40457292
40468587
+
PPP2R1A
chr19
52190048
52229518
+
SYVN1
chr11
65121780
65134533
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:NA
Display:



Experiment Detail

GEO ID:GSE25634
Sample Source:Amniotic Fluid
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:NA
RNA Extract protocol:RNA was extracted from 10 mL amniotic fluid supernatant with 30 mL TRIzol LS Reagent (Invitrogen, Carlsbad, CA) and 8 mL chloroform.
RNA library preparation protocol:biotin Samples were labeled using the FL-Ovation™ cDNA Biotin Module V2 (NuGEN, San Carlos, CA).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA