Entry Detail



General Information

Database ID:exR0017290
RNA Name:ADAM10
RNA Type:mRNA
Chromosome:chr15
Starnd:-
Coordinate:
Start Site(bp):58588809End Site(bp):58749791
External Links:ENSG00000137845



Disease Information

Disease Name:Trisomy 18 Syndrome
Disease Category:Congenital, Hereditary, and Neonatal Diseases and Abnormalities
MeSH ID:D000073842
Type:Diseases Category/Congenital, Hereditary, and Neonatal Diseases and Abnormalities
Alias:Trisomy 18 Syndromes//Trisomy E Syndrome//Complete Trisomy 18 Syndrome//Edwards Syndrome//Trisomy 18//Mosaic Trisomy 18 Syndrome



Expression Detail

GEO ID:GSE25634
Description:Expression profiles of amniotic fluid from human fetuses with Trisomy 18 and euploid controls
Experimental Design:Disease vs Control
Case Disease Type:Trisomy 18 Syndrome
Case Disease SubType:NA
Case Sample:Trisomy 18 Syndrome
Control Sample:Normal
Number of Case:5
Number of Control:6
Number of Samples:11





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
RPS11
chr19
49496365
49499708
+
THUMPD3
chr3
9362971
9386791
+
ATXN3
chr14
92044496
92106621
-
NUDT21
chr16
56429133
56452199
-
MORF4L1
chr15
78810487
78898139
+
RPS24
chr10
78033760
78056813
+
SMARCC1
chr3
47585269
47782106
-
YY1
chr14
100238298
100282788
+
RB1CC1
chr8
52622458
52745843
-
SPATS2L
chr2
200305881
200482264
+
MAPK9
chr5
180233143
180292099
-
RFLNA
chr12
123973241
124316024
+
TCTN3
chr10
95663396
95694143
-
RPL13
chr16
89560657
89566828
+
MRPL30
chr2
99181152
99199561
+
METTL2B
chr7
128476729
128506602
+
MPZL1
chr1
167721192
167791919
+
OSBP
chr11
59574398
59615774
-
PBX1
chr1
164555584
164899296
+
TAB2
chr6
149218641
149411613
+
RBM42
chr19
35629030
35637686
+
WBP11
chr12
14784582
14803486
-
TMEM189
chr20
50118254
50153734
-
TRIM28
chr19
58544064
58550722
+
GNAI3
chr1
109548615
109600195
+
ANXA6
chr5
151100706
151157785
-
XRCC6
chr22
41621119
41664048
+
PGM3
chr6
83161150
83193936
-
ACTN4
chr19
38647649
38731589
+
E2F2
chr1
23506438
23531233
-
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-1248
chr3
186786675
186786701
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AL096870.2
chr14
24209646
24215987
-
AC068790.8
chr12
123973215
124088594
+
AL645465.1
chr1
244375100
244409592
-
FGD5-AS1
chr3
14920347
14948424
-
Display:



Experiment Detail

GEO ID:GSE25634
Sample Source:Amniotic Fluid
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:NA
RNA Extract protocol:RNA was extracted from 10 mL amniotic fluid supernatant with 30 mL TRIzol LS Reagent (Invitrogen, Carlsbad, CA) and 8 mL chloroform.
RNA library preparation protocol:biotin Samples were labeled using the FL-Ovation™ cDNA Biotin Module V2 (NuGEN, San Carlos, CA).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA