Entry Detail



General Information

Database ID:exR0017301
RNA Name:ADAM23
RNA Type:mRNA
Chromosome:chr2
Starnd:+
Coordinate:
Start Site(bp):206443532End Site(bp):206621127
External Links:ENSG00000114948



Disease Information

Disease Name:Trisomy 18 Syndrome
Disease Category:Congenital, Hereditary, and Neonatal Diseases and Abnormalities
MeSH ID:D000073842
Type:Diseases Category/Congenital, Hereditary, and Neonatal Diseases and Abnormalities
Alias:Trisomy 18 Syndromes//Trisomy E Syndrome//Complete Trisomy 18 Syndrome//Edwards Syndrome//Trisomy 18//Mosaic Trisomy 18 Syndrome



Expression Detail

GEO ID:GSE25634
Description:Expression profiles of amniotic fluid from human fetuses with Trisomy 18 and euploid controls
Experimental Design:Disease vs Control
Case Disease Type:Trisomy 18 Syndrome
Case Disease SubType:NA
Case Sample:Trisomy 18 Syndrome
Control Sample:Normal
Number of Case:5
Number of Control:6
Number of Samples:11





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ASCC2
chr22
29788609
29838304
-
C10orf82
chr10
116663696
116670264
-
C20orf27
chr20
3753508
3768387
-
CABP1
chr12
120640552
120667324
+
CBL
chr11
119206298
119313926
+
DDOST
chr1
20651767
20661544
-
DHRS7B
chr17
21123364
21193265
+
EIF5A
chr17
7306999
7312463
+
GMDS
chr6
1623806
2245605
-
GRINA
chr8
143990056
143993415
+
HERC2
chr15
28111040
28322172
-
HMGB2
chr4
173331376
173334432
-
HSP90AB1
chr6
44246166
44253888
+
HSP90B1
chr12
103930107
103953645
+
IVNS1ABP
chr1
185296388
185317273
-
MDC1
chr6
30699807
30717447
-
NPM1
chr5
171387116
171411137
+
PIP4P1
chr14
20457719
20461612
-
RPL13
chr16
89560657
89566828
+
RPL23
chr17
38847860
38853764
-
RRAGA
chr9
19049427
19051025
+
SLC39A6
chr18
36108531
36129385
-
TEKT3
chr17
15303811
15341632
-
TMUB2
chr17
44186970
44191929
+
USP1
chr1
62436297
62451804
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:NA
Display:



Experiment Detail

GEO ID:GSE25634
Sample Source:Amniotic Fluid
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:NA
RNA Extract protocol:RNA was extracted from 10 mL amniotic fluid supernatant with 30 mL TRIzol LS Reagent (Invitrogen, Carlsbad, CA) and 8 mL chloroform.
RNA library preparation protocol:biotin Samples were labeled using the FL-Ovation™ cDNA Biotin Module V2 (NuGEN, San Carlos, CA).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA