Entry Detail



General Information

Database ID:exR0017318
RNA Name:ADAMTS17
RNA Type:mRNA
Chromosome:chr15
Starnd:-
Coordinate:
Start Site(bp):99971437End Site(bp):100342005
External Links:ENSG00000140470



Disease Information

Disease Name:Trisomy 18 Syndrome
Disease Category:Congenital, Hereditary, and Neonatal Diseases and Abnormalities
MeSH ID:D000073842
Type:Diseases Category/Congenital, Hereditary, and Neonatal Diseases and Abnormalities
Alias:Trisomy 18 Syndromes//Trisomy E Syndrome//Complete Trisomy 18 Syndrome//Edwards Syndrome//Trisomy 18//Mosaic Trisomy 18 Syndrome



Expression Detail

GEO ID:GSE25634
Description:Expression profiles of amniotic fluid from human fetuses with Trisomy 18 and euploid controls
Experimental Design:Disease vs Control
Case Disease Type:Trisomy 18 Syndrome
Case Disease SubType:NA
Case Sample:Trisomy 18 Syndrome
Control Sample:Normal
Number of Case:5
Number of Control:6
Number of Samples:11





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC022384.1
chr3
10249372
10285796
+
ATXN7L3
chr17
44191805
44200113
-
BRD4
chr19
15235519
15332545
-
E2F2
chr1
23506438
23531233
-
EIF4G3
chr1
20806292
21176888
-
ERCC1
chr19
45407333
45478828
-
FUBP3
chr9
130578965
130638352
+
LAMA3
chr18
23689443
23956222
+
LAMA5
chr20
62307955
62367312
-
MAP1B
chr5
72107234
72209565
+
NCOR1
chr17
16029157
16218185
-
PKN1
chr19
14433053
14471867
+
PTPRU
chr1
29236516
29326813
+
SELENOS
chr15
101270817
101277500
-
TATDN2
chr3
10248023
10281218
+
TICRR
chr15
89575469
89631056
+
TMEM151B
chr6
44270450
44307506
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:NA
Display:



Experiment Detail

GEO ID:GSE25634
Sample Source:Amniotic Fluid
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:NA
RNA Extract protocol:RNA was extracted from 10 mL amniotic fluid supernatant with 30 mL TRIzol LS Reagent (Invitrogen, Carlsbad, CA) and 8 mL chloroform.
RNA library preparation protocol:biotin Samples were labeled using the FL-Ovation™ cDNA Biotin Module V2 (NuGEN, San Carlos, CA).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA