Entry Detail



General Information

Database ID:exR0017321
RNA Name:ADAMTS2
RNA Type:mRNA
Chromosome:chr5
Starnd:-
Coordinate:
Start Site(bp):179110853End Site(bp):179345461
External Links:ENSG00000087116



Disease Information

Disease Name:Trisomy 18 Syndrome
Disease Category:Congenital, Hereditary, and Neonatal Diseases and Abnormalities
MeSH ID:D000073842
Type:Diseases Category/Congenital, Hereditary, and Neonatal Diseases and Abnormalities
Alias:Trisomy 18 Syndromes//Trisomy E Syndrome//Complete Trisomy 18 Syndrome//Edwards Syndrome//Trisomy 18//Mosaic Trisomy 18 Syndrome



Expression Detail

GEO ID:GSE25634
Description:Expression profiles of amniotic fluid from human fetuses with Trisomy 18 and euploid controls
Experimental Design:Disease vs Control
Case Disease Type:Trisomy 18 Syndrome
Case Disease SubType:NA
Case Sample:Trisomy 18 Syndrome
Control Sample:Normal
Number of Case:5
Number of Control:6
Number of Samples:11





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
BLOC1S5-TXNDC5
chr6
7881522
8064364
-
DHRS11
chr17
36591879
36600804
+
ECI1
chr16
2239402
2252300
-
GYG1
chr3
148991341
149027668
+
IGF2
chr11
2129112
2141238
-
INS-IGF2
chr11
2132538
2161209
-
KHDRBS1
chr1
32013868
32060850
+
MARCKSL1
chr1
32333839
32336233
-
PAFAH1B3
chr19
42297033
42303546
-
TOP2A
chr17
40388525
40417896
-
TXNDC5
chr6
7881517
7910788
-
ZNF703
chr8
37695782
37700019
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
LINC00910
chr17
43338741
43389199
-
Display:



Experiment Detail

GEO ID:GSE25634
Sample Source:Amniotic Fluid
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:NA
RNA Extract protocol:RNA was extracted from 10 mL amniotic fluid supernatant with 30 mL TRIzol LS Reagent (Invitrogen, Carlsbad, CA) and 8 mL chloroform.
RNA library preparation protocol:biotin Samples were labeled using the FL-Ovation™ cDNA Biotin Module V2 (NuGEN, San Carlos, CA).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA