Entry Detail



General Information

Database ID:exR0017327
RNA Name:ADAMTS7
RNA Type:mRNA
Chromosome:chr15
Starnd:-
Coordinate:
Start Site(bp):78759206End Site(bp):78811464
External Links:ENSG00000136378



Disease Information

Disease Name:Trisomy 18 Syndrome
Disease Category:Congenital, Hereditary, and Neonatal Diseases and Abnormalities
MeSH ID:D000073842
Type:Diseases Category/Congenital, Hereditary, and Neonatal Diseases and Abnormalities
Alias:Trisomy 18 Syndromes//Trisomy E Syndrome//Complete Trisomy 18 Syndrome//Edwards Syndrome//Trisomy 18//Mosaic Trisomy 18 Syndrome



Expression Detail

GEO ID:GSE25634
Description:Expression profiles of amniotic fluid from human fetuses with Trisomy 18 and euploid controls
Experimental Design:Disease vs Control
Case Disease Type:Trisomy 18 Syndrome
Case Disease SubType:NA
Case Sample:Trisomy 18 Syndrome
Control Sample:Normal
Number of Case:5
Number of Control:6
Number of Samples:11





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
CCT7
chr2
73233420
73253021
+
CHD4
chr12
6570082
6614524
-
CMTM3
chr16
66603874
66613892
+
EEF2
chr19
3976056
3985463
-
ENOPH1
chr4
82430590
82461177
+
FADS1
chr11
61799627
61829318
-
GNAI2
chr3
50226292
50259362
+
HEY1
chr8
79764010
79767857
-
HSP90AB1
chr6
44246166
44253888
+
LSS
chr21
46188141
46228824
-
MEIS3
chr19
47403124
47419527
-
MORF4L1
chr15
78810487
78898139
+
NXN
chr17
799310
979776
-
OLFML2A
chr9
124777133
124814885
+
PABPC1
chr8
100685816
100722809
-
POU5F1
chr6
31164337
31180731
-
PPP1R13L
chr19
45379638
45406349
-
SMG1
chr16
18804853
18926454
-
SNX17
chr2
27370496
27377535
+
TPM3
chr1
154155304
154194648
-
TRAF7
chr16
2155698
2178129
+
WWC2
chr4
183099257
183320777
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
SNHG15
chr7
44983023
44986961
-
Display:



Experiment Detail

GEO ID:GSE25634
Sample Source:Amniotic Fluid
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:NA
RNA Extract protocol:RNA was extracted from 10 mL amniotic fluid supernatant with 30 mL TRIzol LS Reagent (Invitrogen, Carlsbad, CA) and 8 mL chloroform.
RNA library preparation protocol:biotin Samples were labeled using the FL-Ovation™ cDNA Biotin Module V2 (NuGEN, San Carlos, CA).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA